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Adolphson, Debbie L., Arnold, Terri L., Fitzpatrick, Faith A., Harris, Mitchell A., Richards, Kevin D., Scudder, Barbara C., and Stewart, Jana S., 2002, Physical, chemical, and biological methods and data from the urban land- use-gradient study, Des Plaines and Fox River Basins, Illinois, 1999-2001: U.S. Geological Survey Open-File Report 01-459, 20 p.  Available Online

Adolphson, Debbie L., Fazio, David J., and Harris, Mitchell A., 2001, Habitat, biota, sediment characteristics at selected stations in the Lower Illinois River Basin, Illinois, 1996-98: U.S. Geological Survey Water-Resources Investigations Report 01-4068, 52 p.  Available Online

Alexander, R.B., Böhlke, J.K., Boyer, E.W., David, M.B., Harvey, J.W., Mulholland, P.J., Seitzinger, S.P., Tobias, C.R., Tonitto, C., Wollheim, W.M., 2009, Dynamic modeling of nitrogen losses in river networks unravels the coupled effects of hydrological and biogeochemical processes : Biogeochemistry (2009) 93:91-116, p. 91-116.  doi: 10.1007/s10533-008-9274-8 Available Online

Alexander, R.B., Smith, R.A., Schwarz, G.S., Boyer, E.W., Nolan, J.V., and Brakebill, J.W., 2008, Differences in phosphorus and nitrogen delivery to the Gulf of Mexico from the Mississippi River Basin: Environmental Science and Technology, vol. 42, no. 3, p. 822-830.  doi: 10.1021/es0716103 Available Online

Alexander, Richard B., Smith, Richard A., and Schwarz, Gregory E., 2000, Effect of stream channel size on the delivery of nitrogen to the Gulf of Mexico: Nature, vol. 403, February 17, 2000, p. 758-761.  Available Online

Arnold, T.L., Warner, K.L., Groschen, G.E., Caldwell, J.P., and Kalkhoff, S.J., 2008, Hydrochemical regions of the glacial aquifer system, northern United States, and their environmental and water-quality characteristics: U.S. Geological Survey Scientific Investigations Report 2008-5015, 84 p.  Available Online

Arnold, Terri L., and Friedel, Michael J., 2000, Effects of land use on recharge potential of surficial and shallow bedrock aquifers in the Upper Illinois River Basin: U.S. Geological Survey Water-Resources Investigations Report 00-4027, 18 p.  Available Online

Arnold, Terri L., Sullivan, Daniel J., Harris, Mitchell A., Fitzpatrick, Faith A., Scudder, Barbara C., Ruhl, Peter M., Hanchar, Dorothea W., and Stewart, Jana S., 1999, Environmental setting of the Upper Illinois River Basin and implications for water quality: U.S. Geological Survey Water-Resources Investigations Report 98-4268, 67 p.  Available Online

Ayotte, J.D., Flanagan, S.M., and Morrow, W.S., 2007, Occurrence of uranium and 222radon in glacial and bedrock aquifers in the northern United States, 1993-2003: U.S. Geological Survey Scientific Investigations Report 2007-5037, 84 p.  Available Online

Böhlke, J.K., Antweiler, R.C., Harvey, J.W., Laursen, A.E., Smith, L.K., Smith R.L., and Voytek, M.A., 2009, Multi-scale measurements and modeling of denitrification: Biogeochemistry (2009) 93:117-141, p. 117-141.  doi: 10.1007/s10533-008-9282-8 Available Online

Baker, N.T., and Stone,W.W., 2014, Annual agricultural pesticide use for midwest stream-quality assessment, 2012-13: U.S. Geological Survey Data Series 863, pamphlet, 4 tables, 17 p.  Available Online

Belden, J.B., Gilliom, R.J., Martin, J.D., and Lydy, M.J., 2007, Relative toxicity and occurrence patterns of pesticide mixtures in streams draining agricultural watersheds dominated by corn and soybean production: Integrated Environmental Assessment and Management, vol.3, no.1, p. 90-100.   Available Online

Burkart, M.R., Kolpin, D.W., and James, D.E., 1999, Assessing groundwater vulnerability to agrichemical contamination in the Midwest US: Water Science & Technology, vol. 39, no. 3, p. 103-112.  Available Online

Burkart, M.R., Kolpin, D.W., Jaquis, R.J., and Cole, K.J., 1999, Agrichemicals in ground water of the midwestern USA: Journal of Environmental Quality, vol. 28, no. 6, p. 1908-1915.  Available Online

Capel, Paul D., and Larson, Steven J., 2001, Effect of scale on the behavior of atrazine in surface waters: Environmental Science & Technology, vol. 35, no. 4, p. 648-657.  doi: 10.1021/es001123m Available Online

Capel, Paul D., Larson, Steven J., and Winterstein, Thomas A., 2001, The behavior of 39 pesticides in surface waters as a function of scale: Hydrological Processes, vol. 15, p. 1251-1269.  doi: 10.1002/hyp.212 Available Online

Carlisle, D.M., and Meador, M.R., 2007, A biological assessment of streams in the eastern United States using a predictive model for macroinvertebrate assemblages: Journal of the American Water Resources Association, vol. 43, p. 1194-1207.  doi: 10.1111/j.1752-1688.2007.00097.x Available Online

Carlisle, Daren M., Falcone, James, and Meador, Michael R., 2008, Predicting the biological condition of streams: use of geospatial indicators of natural and anthropogenic characteristics of watersheds: Environmental Monitoring and Assessment, 0167-6369 (Print) 1573-2959 (Online) May 21, 2008, p. 143-160.  doi: 10.1007/s10661-008-0256-z Available Online

Carter, J.M., Kingsbury, J.A., Hopple, J.A., and Delzer, G.C., 2010, Concentration data for anthropogenic organic compounds in groundwater, surface water, and finished water of selected community water systems in the United States, 2002-10: U.S. Geological Survey Data Series 544, 36 p., online only.  Available Online

Caskey, B.J., 2003, Relations of stream fish communities to physical and chemical parameters and land use in the Mississippi alluvial plain ecoregion: U.S. Geological Survey Open-File Report 03-31, 99 p.  Available Online

Clark, G.M., and Goolsby, D.A., 1999, Occurrence and transport of acetochlor in streams of the Mississippi River Basin: Journal of Environmental Quality, vol. 28, no. 6, p. 1787-1795.  Available Online

Colman, J.A., 1990, Surface water-quality assessment of the Upper Illinois River Basin in Illinois, Indiana, and Wisconsin: Geochemical data on major and trace-element concentrations in fine fraction streambed sediments: U.S. Geological Survey Open-File Report 90-571, 108 p.  Available Online

Colman, J.A., and Sanzolone, R.F., 1992, Geochemical characterization of streambed sediment in the Upper Illinois River Basin: American Water Resources Association Water Resources Bulletin October 1992, vol. 28, no. 5, p.933.  doi: 10.1111/j.1752-1688.1992.tb03193.x Available Online

Couch, Carol and Hamilton, Pixie, 2002, Effects of urbanization on stream ecosystems: U.S. Geological Survey Fact Sheet FS-042-02, 2 p.  Available Online

Coupe, R.H., Goolsby, D.A., Battaglin, W.A., Böhlke, J.K., McMahon, P.B., and Kendall, C., 2013, Transport of nitrate in the Mississippi River in July-August 1999: Annals of Environmental Science, vol. 7, Article 3, p. 31-46.  Available Online

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