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USGS Water Resources Applications Software: OTIS

OTIS Applications

This page contains a bibliography of OTIS applications that have been published in the literature. Access to HTML and PDF versions of the publications is provided where possible. Note that access to journal articles may be restricted to site visitors with personal or institutional subscriptions to the specific journals. Access to PDF files () requires Adobe Reader or an alternate PDF viewer.

If you have a published OTIS application that is not on this list, please let us know.

Antweiler, R.C. Writer, J.H., and Murphy, S.F., 2014,
Evaluation of wastewater contaminant transport in surface waters using verified Lagrangian sampling: Science of the Total Environment, v. 470-471, p. 551–558, doi: 10.1016/j.scitotenv.2013.09.079
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Argerich, A., Martí, E., Sabater, F., Ribot, M., von Schiller, D., and Riera, J.L., 2008,
Combined effects of leaf litter inputs and a flood on nutrient retention in a Mediterranean mountain stream during fall: Limnology and Oceanography, v. 53, no. 2, p. 631-641, doi:10.4319/lo.2008.53.2.0631
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Argerich, A., Haggerty, R., Martí, E., Sabater, F., and Zarnetske, J., 2011,
Quantification of metabolically active transient storage (MATS) in two reaches with contrasting transient storage and ecosystem respiration: Journal of Geophysical Research, v. 116, G03034, doi:10.1029/2010JG001379
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Argerich, A.. Martí, E., Sabater, F., Haggerty, R., Ribot, M., 2011,
Influence of transient storage on stream nutrient uptake based on substrata manipulation: Aquatic Sciences, v. 73, no. 3, p. 365-376, doi: 10.1007/s00027-011-0184-9
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Argerich, A., Martí, E., Sabater, F., and Ribot, M., 2011,
Temporal variation of hydrological exchange and hyporheic biogeochemistry in a headwater stream during autumn: Journal of the North American Benthological Society, v. 30, no. 3, p. 635-652, doi: 10.1899/10-078.1
DOI | PDF

Baker, D.W., and Bledsoe, B.P., and Mueller Price, J., 2012,
Stream nitrate uptake and transient storage over a gradient of geomorphic complexity, north-central Colorado, USA: Hydrological Processes, v. 26, no. 21, p. 3241-3252, doi: 10.1002/hyp.8385
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Battin, T.J., Kaplan, L.A., Newbold, J.D., and Hansen, C.M., 2003,
Contributions of microbial biofilms to ecosystem processes in stream mesocosms: Nature, v. 426, p. 439-442, doi:10.1038/nature02152
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Beaulieu, J.J., Arango, C.P., Balz, D.A., and Shuster, W.D., 2013,
Continuous monitoring reveals multiple controls on ecosystem metabolism in a suburban stream: Freshwater Biology, v. 58, no. 5, p. 918-937, doi: 10.1111/fwb.12097
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Becker, J.F., Endreny, T.A., Robinson, J.D., 2013,
Natural channel design impacts on reach-scale transient storage: Ecological Engineering, v. 57, p. 380-392, doi: 10.1016/j.ecoleng.2013.04.051
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Bernot, M.J., Tank, J.L., Royer, T.V., and David, M.B., 2006,
Nutrient uptake in streams draining agricultural catchments of the midwestern United States: Freshwater Biology, v. 51, no. 3, p. 499-509, doi:10.1111/j.1365-2427.2006.01508.x
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Bernot, M.J., Sobota, D.J., Hall, R.O., Mulholland, P.J., et al., 2010,
Inter-regional comparison of land-use effects on stream metabolism: Freshwater Biology, v. 55, no. 9, p. 1874-1890, doi:10.1111/j.1365-2427.2010.02422.x
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Böhlke, J.K., Harvey, J.W., and Voytek, M.A., 2004,
Reach-scale isotope tracer experiment to quantify denitrification and related processes in a nitrate-rich stream, midcontinent United States: Limnology and Oceanography, v. 49, no. 3, p. 821-838, doi:10.4319/lo.2004.49.3.0821
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Böhlke, J.K., Antweiler, R.C., Harvey, J.W., Laursen, A.E., Smith, L.K., Smith, R.L., and Voytek, M.A., 2009,
Multi-scale measurements and modeling of denitrification in streams with varying flow and nitrate concentration in the upper Mississippi River basin, USA: Biogeochemistry, v. 93, doi:10.1007/s10533-008-9282-8
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Bott, T.L., Newbold, J.D., and Arscott, D.B., 2006,
Ecosystem metabolism in piedmont streams: Reach geomorphology modulates the influence of riparian vegetation: Ecosystems, v. 9, no. 3, p. 398-421, doi:10.1007/s10021-005-0086-6
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Briggs, M.A., Gooseff, M.N., Peterson, B.J., Morkeski, K., Wollheim, W.M., and Hopkinson, C.S., 2010,
Surface and hyporheic transient storage dynamics throughout a coastal stream network: Water Resources Research, v. 46, W06516, doi:10.1029/2009WR008222
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Chapra, S.C., and Wilcock, R.J., 2000,
Transient storage and gas transfer in lowland stream: Journal of Environmental Engineering, v. 126, no. 8, p. 708-712, doi:10.1061/(ASCE)0733-9372(2000)126:8(708)
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Choi, J., Hulseapple, S.M., Conklin, M.H., and Harvey, J.W., 1999,
Modeling CO2 degassing and pH in a stream-aquifer system: Journal of Hydrology, v. 209, p. 297-310, doi:10.1016/S0022-1694(98)00093-6
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Choi, J., Harvey, J.W., and Conklin, M.H., 2000,
Characterizing multiple timescales of stream and storage zone interaction that affect solute fate and transport in streams: Water Resources Research, v. 36, no. 6, p 1511-1518, doi:10.1029/2000WR900051
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Claessens, L., and Tague, C.L., 2009,
Transport-based method for estimating in-stream nitrogen uptake at ambient concentration from nutrient addition experiments: Limnology and Oceanography Methods, v. 7, p. 811-822
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Claessens, L., Tague, C.L., Groffman, P.M., and Melack, J.M., 2010,
Longitudinal and seasonal variation of stream N uptake in an urbanizing watershed: Effect of organic matter, stream size, transient storage and debris dams: Biogeochemistry, v. 98, p. 45-62, doi:10.1007/s10533-009-9375-z
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Claessens, L., Tague, C.L., Groffman, P.M., and Melack, J.M., 2010,
Longitudinal assessment of the effect of concentration on stream N uptake rates in an urbanizing watershed: Biogeochemistry, v. 98, p. 63-74, doi:10.1007/s10533-009-9376-y
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Cozzetto, K., McKnight, D., Nylen, T., and Fountain, A., 2006,
Experimental investigations into processes controlling stream and hyporheic temperatures, Fryxell Basin, Antarctica: Advances in Water Resources, v. 29, no. 2, p. 130-153, doi:10.1016/j.advwatres.2005.04.012
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Cozzetto, K.D., Bencala, K.E., Gooseff, M.N., and McKnight, D.M., 2013,
The influence of stream thermal regimes and preferential flow paths on hyporheic exchange in a glacial meltwater stream: Water Resources Research, v. 49, p. 5552–5569, doi: 10.1002/wrcr.20410
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Crenshaw, C.L., Grimm, N.B., Zeglin, L.H., Sheibley, R.W., Dahm, C.N., and Ershall, A.D.P., 2010,
Dissolved inorganic nitrogen dynamics in the hyporheic zone of reference and human-altered southwestern U. S. streams: Fundamental and Applied Limnology / Archiv für Hydrobiologie, v. 176, no. 4, p. 391-405, doi:10.1127/1863-9135/2010/0176-0391
DOI

Crouch, C.M., McKnight, D.M., and Todd, A.S., 2013,
Quantifying sources of increasing zinc from acid rock drainage in an alpine catchment under a changing hydrologic regime: Hydrological Processes, v. 27, no. 5, p 721-733, doi: 10.1002/hyp.9650
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De Smedt, F., Brevis, W., and Debels, P., 2005,
Analytical solution for solute transport resulting from instantaneous injection in streams with transient storage: Journal of Hydrology, v. 315, p. 25-39, doi:10.1016/j.jhydrol.2005.04.002
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De Smedt, F., 2006,
Analytical solutions for transport of decaying solutes in rivers with transient storage: Journal of Hydrology, v. 330, p. 672-680, doi:10.1016/j.jhydrol.2006.04.042
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Dodds, W.K., et al., 2008,
Nitrogen cycling and metabolism in the thalweg of a prairie river: Journal of Geophysical Research, v. 113, G04029, doi:10.1029/2008JG000696
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Duff, J.H., Tesoriero, A.J., Richardson, W.B., Strauss, E.A., and Munn, M.D., 2008,
Whole-stream response to nitrate loading in three streams draining agricultural landscapes: Journal of Environmental Quality, v. 37, no. 3, p. 1133-1144, doi:10.2134/jeq2007.0187
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Edwardson, K.J., Bowden, W.B., Dahm, C., and Morrice, J., 2003,
The hydraulic characteristics and geochemistry of hyporheic and parafluvial zones in Artic tundra streams, north slope, Alaska: Advances in Water Resources, v. 26, no. 9, p. 907-924, doi:10.1016/S0309-1708(03)00078-2
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Ensign, S.H., and Doyle, M.W., 2005,
In-channel transient storage and associated nutrient retention: Evidence from experimental manipulations: Limnology and Oceanography, v. 50, no. 6, p. 1740-1751, doi:10.4319/lo.2005.50.6.1740
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Fabian, M.W., Endreny, T.A., Bottacin-Busolin, A., and Lautz, L.K., 2011,
Seasonal variation in cascade-driven hyporheic exchange, northern Honduras: Hydrological Processes, v. 25, no. 10, p. 1630-1646, doi: 10.1002/hyp.7924
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Faulkner, B.R., and Campana, M.E., 2007,
Compartmental model of nitrate retention in streams: Water Resources Research, v. 43, W02406, doi:10.1029/2006WR004920
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Fellows, C.S., Valett, H.M., and Dahm, C.N., 2001,
Whole-stream metabolism in two montane streams: Contribution of the hyporheic zone: Limnology and Oceanography, v. 46, no. 3, p. 523-531
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Fernald, A.G., Wigington, P.J., and Landers, D.H., 2001,
Transient storage and hyporheic flow along the Willamette River, Oregon: Field measurements and model estimates: Water Resources Research, v. 37, no. 6, p. 1681-1694, doi:10.1029/2000WR900338
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Gooseff, M.N., McKnight, D.M., Lyons, W.B., and Blum, A.E., 2002,
Weathering reactions and hyporheic exchange controls on stream water chemistry in a glacial meltwater stream in the McMurdo Dry Valleys: Water Resources Research, v. 38, no. 12, p. 151-1517, doi:10.1029/2001WR000834
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Gooseff, M.N., McKnight, D.M., Runkel, R.L., and Vaughn, B.H., 2003,
Determining long time-scale hyporheic zone flow paths in Antarctic streams: Hydrological Processes, v. 17, no. 9, p. 1691-1710, doi: 10.1002/hyp.1210
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Gooseff, M.N., Wondzell, S.M., Haggerty, R., and Anderson, J., 2003,
Comparing transient storage modeling and residence time distribution (RTD) analysis in geomorphically varied reaches in the Lookout Creek basin, Oregon, USA: Advances in Water Resources, v. 26, no. 9, p. 925-937, doi:10.1016/S0309-1708(03)00105-2
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Gooseff, M.N., McKnight, D.M., and Runkel, R.L., 2004,
Reach-Scale cation exchange controls on major ion chemistry of an Antarctic glacial meltwater stream: Aquatic Geochemistry, v. 10, p. 221-238, doi:10.1007/s10498-004-2260-4
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Gooseff, M.N., McKnight, D.M., Runkel, R.L., and Duff, J.H., 2004,
Denitrification and hydrologic transient storage in a glacial meltwater stream, McMurdo Dry Valleys, Antarctica: Limnology and Oceanography, v. 49, no. 5, p. 1884-1895
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Gooseff, M.N., Bencala, K.E., Scott, D.T., Runkel, R.L., and McKnight, D.M., 2005,
Sensitivity analysis of conservative and reactive stream transient storage models applied to field data from multiple-reach experiments: Advances in Water Resources, v. 28, no. 5, p. 479-492, doi:10.1016/j.advwatres.2004.11.012
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Gooseff, M.N., and McGlynn, B.L., 2005,
A stream tracer technique employing ionic tracers and specific conductance data applied to the Maimai catchment, New Zealand: Hydrological Processes, v. 19, no. 13, p. 2491-2506, doi:10.1002/hyp.5685
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Gooseff, M.N., Briggs, M.A., Bencala, K.E., McGlynn, B.L., Scott, D.T., 2013,
Do transient storage parameters directly scale in longer, combined stream reaches? Reach length dependence of transient storage interpretations: Journal of Hydrology, v. 483, p. 16-25, doi: 10.1016/j.jhydrol.2012.12.046
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Grant, S.B., Litton-Mueller, R.M., and Ahn, J.H., 2011,
Measuring and modeling the flux of fecal bacteria across the sediment-water interface in a turbulent stream: Water Resources Research, v. 47, W05517, 13 p., doi:10.1029/2010WR009460
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Gücker, B., and Boëchat, I.G., 2004,
Stream morphology controls ammonium retention in tropical headwaters: Ecology, v. 85, no. 10, p. 2818-2827, doi:10.1890/04-0171
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Gücker, B., and Pusch, M.T., 2006,
Regulation of nutrient uptake in eutrophic lowland streams: Limnology and Oceanography, v. 51, no. 3, p. 1443-1453, doi:10.4319/lo.2006.51.3.1443
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Gücker, B., Boëchat, I.G., and Giani, A., 2009,
Impacts of agricultural land use on ecosystem structure and whole-stream metabolism of tropical Cerrado streams: Freshwater Biology, v. 54, no. 10, p. 2069-2085, doi:10.1111/j.1365-2427.2008.02069.x
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Hall, R.O. Jr., Tank, J.L., Sobota, D.J., Mulholland, P.J., et al., 2009,
Nitrate removal in stream ecosystems measured by 15N addition experiments: Total uptake: Limnology and Oceanography, v. 54, no. 3, p. 653-665
DOI | PDF

Harvey, J.W., and Fuller, C.C., 1998,
Effect of enhanced manganese oxidation in the hyporheic zone on basin-scale geochemical mass balance: Water Resources Research, v. 34, no. 4, p. 623-636, doi:10.1029/97WR03606
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Harvey, J.W., Conklin, M.H., and Koelsch, R.S., 2003,
Predicting changes in hydrologic retention in an evolving semi-arid alluvial stream: Advances in Water Resources, v. 26, no. 9, p. 939-950, doi:10.1016/S0309-1708(03)00085-X
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Harvey, J.W., Saiers, J.E., Newlin, J.T., 2005,
Solute transport and storage mechanisms in wetlands of the Everglades, south Florida: Water Resources Research, v. 41, W05009, doi:10.1029/2004WR003507
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Harvey, J.W., Newlin, J.T., and Krupa, S.L., 2006,
Modeling decadal timescale interactions between surface water and ground water in the central Everglades, Florida, USA: Journal of Hydrology v. 320. p. 400-420, doi:10.1016/j.jhydrol.2005.07.024
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Herrman, K.S., Bouchard, V., Granata, T., Carey, A.E., and Moore, R.H., 2010,
The effect of riparian land use on transport hydraulics in agricultural headwater streams located in northeast Ohio, USA: Hydrological Processes, v. 24, no. 1, p.1-12, doi:10.1002/hyp.7489
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Hill, B.H., McCormick, F.H., Harvey, B.C., Johnson, S.L., Warren, M.L., and Elonen, C. M., 2010,
Microbial enzyme activity, nutrient uptake and nutrient limitation in forested streams: Freshwater Biology, v. 55, no. 5, p. 1005-1019, doi:10.1111/j.1365-2427.2009.02337.x
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Hünken, A., 2006,
Resuspension of particulate organic matter in sand-bed lowland streams: Archiv fur Hydrobiologie, v. 166, no. 2, p. 169-183, doi:10.1127/0003-9136/2006/0166-0169
DOI

Hünken, A., Mutz, M., 2007,
Field studies on factors affecting very fine and ultra fine particulate organic matter deposition in low-gradient sand-bed streams: Hydrological Processes, v. 21, p. 525-533, doi:10.1002/hyp.6263
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Jin, H., and Ward, G.M., 2005,
Hydraulic characteristics of a small Coastal Plain stream of the southeastern United States: effects of hydrology and season: Hydrological Processes, v. 19, p. 4147-4160, doi:10.1002/hyp.5878
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Jin, H.S., White, D., Ramsey, J., Kipphut, G., 2012,
Mixed tracer injection method to measure reaeration coefficients in small streams: Water, Air, & Soil Pollution, v. 223, no. 8, p. 5297-5306, doi: 10.1007/s11270-012-1280-8
DOI | PDF

Jin, L., Siegel, D.I., Lautz, L.K., and Otz, M.H., 2009,
Transient storage and downstream solute transport in nested stream reaches affected by beaver dams: Hydrological Processes, v. 23, no. 17, p. 2438-2449, doi:10.1002/hyp.7359
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Johnson, Z.C., Warwick, J.J., and Schumer, R., 2014,
Factors affecting hyporheic and surface transient storage in a western U.S. river: Journal of Hydrology, v. 510, p. 325-339, doi: 10.1016/j.jhydrol.2013.12.037
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Kaplan, L.A., Wiegner, T.N., Newbold, J.D., Ostrom, P.H., and Gandhi, H., 2008,
Untangling the complex issue of dissolved organic carbon uptake: A stable isotope approach: Freshwater Biology, v. 53, no. 5, p. 855-864, doi:10.1111/j.1365-2427.2007.01941.x
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Kazezyilmaz-Alhan, C.M., and Medina Jr., M.A., 2006,
Stream solute transport incorporating hyporheic zone processes: Journal of Hydrology, v. 329, p. 26-38, doi:10.1016/j.jhydrol.2006.02.003
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Keefe, S.H., Barber, L.B., Runkel, R.L., and Ryan, J.N., 2004,
Fate of volatile organic compounds in constructed wastewater treatment wetlands: Environmental Science & Technology, v. 38, no. 7, p. 2209-2216, doi:10.1021/es034661i
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Keefe, S.H., Barber, L.B., Runkel, R.L., Ryan, J.N., McKnight, D.M., and Wass, R.D., 2004,
Conservative and reactive solute transport in constructed wetlands: Water Resources Research, v. 40, W01201, doi:10.1029/2003WR002130
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Keefe, S. H., Daniels (Thullen), J.S., Runkel, R.L., Wass, R.D., Stiles, E.A., and Barber, L.B., 2010,
Influence of hummocks and emergent vegetation on hydraulic performance in a surface flow wastewater treatment wetland: Water Resources Research, v. 46, W11518, doi:10.1029/2010WR009512
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Kelleher, C., Wagener, T., McGlynn, B., Ward, A. S., Gooseff, M. N., and Payn, R. A., 2013,
Identifiability of transient storage model parameters along a mountain stream: Water Resources Research, v. 49, no. 9, p. 5290-5306, doi: 10.1002/wrcr.20413
DOI | PDF

Knust, A.E., and Warwick, J.J., 2009,
Using a fluctuating tracer to estimate hyporheic exchange in restored and unrestored reaches of the Truckee River, Nevada, USA: Hydrological Processes, v. 23, no. 8, p. 1119-1130, doi:10.1002/hyp.7218
DOI | PDF

Koch, J.C., Runkel, R.L., Striegl, R., and McKnight, D.M., 2013,
Hydrologic controls on the transport and cycling of carbon and nitrogen in a boreal catchment underlain by continuous permafrost: Journal of Geophysical Research: Biogeosciences, v. 118, no.2, p. 698-712, doi: 10.1002/jgrg.20058
DOI | PDF

Laeanen A., and Bencala, K.E., 2001,
Transient storage assessment of dye-tracer injections in rivers of the Willamette Basin, Oregon: Journal of the American Water Resources Association, v. 37, no. 2, p. 367-377, doi:10.1111/j.1752-1688.2001.tb00975.x
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Lamontagne, S., and Cook, P.G., 2007,
Estimation of hyporheic water residence time in situ using 222Rn disequilibrium: Limnology and Oceanography: Methods, v. 5, p. 407-416
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Lautz, L.K., Siegel, D.I., and Bauer, R.L., 2006,
Impact of debris dams on hyporheic interaction along a semi-arid stream: Hydrological Processes, v. 20, no. 1, p. 183-196, doi:10.1002/hyp.5910
DOI | PDF

Lautz, L.K., and Siegel, D.I., 2007,
The effect of transient storage on nitrate uptake lengths in streams: an inter-site comparison: Hydrological Processes, v. 21, no. 26, p. 3533-3548, doi:10.1002/hyp.6569
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Lees, M.J., Camacho, L.A., and Chapra, S.C., 2000,
On the relationship of transient-storage and aggregated dead zone models to solute transport in streams: Water Resources Research, v. 36, no. 1, p. 213-224. doi:10.1029/1999WR900265
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Lottig, N.R., Valett, H.M., Schreiber, M.E., and Webster, J.R., 2007,
Flooding and arsenic contamination: Influences on ecosystem structure and function in an Appalachian headwater stream: Limnology and Oceanography, v. 52, no. 5, p. 1991-2001, doi:10.4319/lo.2007.52.5.1991
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Magirl, C.S., et al., 2011,
Baseline hydrologic studies in the lower Elwha prior to dam removal: In: Coastal Habitats of the Elwha River, Washington - Biological and Physical Patterns and Processes prior to Dam removal, U.S. Geological Survey Scientific Investigation Report 2011-5120, eds. Duda, J.J., Warrick, J.A., and Magirl, C.S.
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Malcolm, I.A., Middlemas, C.A., Soulsby, C., Middlemas, S.J., and Youngson, A.F., 2010,
Hyporheic zone processes in a canalised agricultural stream: implications for salmonid embryo survival: Fundamental and Applied Limnology / Archiv für Hydrobiologie, v. 176, no. 4, p. 319-336, doi:10.1127/1863-9135/2010/0176-0319
DOI

Martinez, C.J., and Wise, W.R., 2003,
Analysis of constructed treatment wetland hydraulics with the transient storage model OTIS: Ecological Engineering, v. 20, p. 211-222, doi:10.1016/S0925-8574(03)00029-6
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McKnight, D.M., Kimball, B.A., and Runkel, R.L., 2001,
pH dependence of iron photoreduction in a Rocky Mountain stream affected by acid mine drainage: Hydrological Processes, v. 15, p. 1979-1992, doi:10.1002/hyp.251
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McKnight, D.M., Hornberger, G.M., Bencala, K.E., and Boyer, E.W., 2002,
In-stream sorption of fulvic acid in an acidic stream: A stream-scale transport experiment: Water Resources Research, v. 38, no. 1, doi:10.1029/2001WR000269
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McKnight, D.M., Runkel, R.L., Tate, C.M., Duff, J.H., Moorhead, D.L., 2004,
Inorganic N and P dynamics of Antarctic glacial meltwater streams as controlled by hyporheic exchange and benthic autotrophic communities: Journal of the North American Benthological Society, v. 23, no. 2, p. 171-188.
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Miller, M.P., McKnight, D.M., Cory, R.M., Williams, M.W., and Runkel, R.L., 2006,
Hyporheic exchange and fulvic acid redox reactions in an alpine stream/wetland ecosystem, Colorado front range: Environmental Science and Technology, v. 40, no. 19, p. 5943-5949, doi:10.1021/es060635j
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Morrice, J.A., Valett, H.M., Dahm, C.N., and Campana, M.E., 1997,
Alluvial characteristics, groundwater-surface water exchange and hydrological retention in headwater streams: Hydrological Processes, v. 11, p. 253-267, doi:10.1002/(SICI)1099-1085(19970315)11:3<253::AID-HYP439>3.0.CO;2-J
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Mukherjee, A, Fryar, A.E., and Lasage, D.M., 2005,
Using tracer tests to assess natural attenuation of contaminants along a channelized coastal plain stream: Environmental & Engineering Geoscience, v. XI, no. 4, p. 371-382, doi:10.2113/11.4.371
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Mulholland P.J., et al., 2008,
Stream denitrification across biomes and its response to anthropogenic nitrate loading: Nature, v. 452, p. 202-205, doi:10.1038/nature06686
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Mulholland, P.J., Hall, R.O. Jr., Sobota, D.J., Dodds, W.K., Findlay, S.E.G., Grimm, N.B., Hamilton, S.K., McDowell, W.H., et al., 2009,
Nitrate removal in stream ecosystems measured by 15N addition experiments: Denitrification: Limnology and Oceanography, v. 54, no. 3, p. 666-680
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Neill, C., Deegan, L.A., Thomas, S.M., Haupert, C.L., Krusche, A.V., Ballester, V.M., and Victoria, R.L., 2006,
Deforestation alters the hydraulic and biogeochemical characteristics of small lowland Amazonian streams: Hydrological Processes, v. 20, no. 12, p. 2563-2580, doi:10.1002/hyp.6216
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Orr, C.H., Rogers, K.L., and Stanley, E.H., 2006,
Channel morphology and P uptake following removal of a small dam: Journal of the North American Benthological Society, v. 25, no.3, p. 556-568, doi:10.1899/0887-3593(2006)25[556:CMAPUF]2.0.CO;2
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Orr, C.H., Clark, J.J., Wilcock, P.R., Finlay, J.C., Doyle, M.W., 2009,
Comparison of morphological and biological control of exchange with transient storage zones in a field-scale flume: Journal of Geophysical Research, v. 114, G02019, doi:10.1029/2008JG000825
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Phanikumar, M.S., Aslam, I., Shen, C., Long, D.T., and Voice, T.C., 2007,
Separating surface storage from hyporheic retention in natural streams using wavelet decomposition of acoustic Doppler current profiles: Water Resources Research, v. 43, W05406, doi:10.1029/2006WR005104
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Potter, J.D., McDowell, W.H., Merriam, J.L., Peterson, B.J., and Thomas, S.M., 2010,
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