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Eberts, Sandra M., ed., 2011, Hydrogeologic settings and groundwater-flow simulations for regional investigations of the transport of anthropogenic and natural contaminants to public-supply wells--Investigations begun in 2004: U.S. Geological Survey Professional Paper 1737-B, 127 p.  Available Online

Eberts, S.M., Böhlke, J.K., Kauffman, L.J., and Jurgens, B.C., 2012, Comparison of particle-tracking and lumped-parameter age-distribution models for evaluating vulnerability of production wells to contamination: Hydrogeology Journal, v. 20, p. 263-282.  doi: 10.1007/s10040-011-0810-6 Available Online

Domagalski, J.L., Ator, S., Coupe, R., McCarthy, K., Lampe, D., Sandstrom, M., and Baker, N., 2008, Comparative study of transport processes of nitrogen, phosphorus, and herbicides to streams in five agricultural basins, USA: Journal of Environmental Quality, vol. 37, p. 1158-1169.  doi: 10.2134/jeq2007.0408 Available Online

Domagalski, J.L., and Johnson, Henry, 2012, Phosphorus and Groundwater: Establishing links between agricultural use and tansport to streams: U.S. Geological Survey Fact Sheet 2012-3004 , 4 p.  Available Online

Cuffney, Thomas F., Meador, Michael R., Porter, Stephen D., and Gurtz, Martin E., 2000, Responses of physical, chemical, and biological indicators of water quality to a gradient of agricultural land use in the Yakima River Basin, Washington: Environmental Monitoring and Assessment, vol. 64, p. 259-270.  doi: 10.1023/A:1006473106407 Available Online

Cuffney, T.F., Zappia, Humbert, Giddings, E.M.P., and Coles, J.R., 2005, Effects of urbanization on benthic macroinvertebrated assemblages in contrasting environmental settings: Boston, Massachusetts; Birmingham, Alabama; and Salt Lake City, Utah: in Brown, L.R., Gray, R.H., Hughes, R.M., and Meador, M.R., eds., Effects of Urbanization on Stream Ecosystems: AFS Symposium 47, American Fisheries Society, p. 361-407.  Available Online

Cuffney, T.F., Kashuba, R., Qain, S.S., Alameddine, I., Cha, Y.K., and Lee, B., 2011, Multilevel regression models describing regional patterns of invertebrate and algal responses to urbanization across the USA: Journal of the North American Benthological Society, vol. 30, no. 3, p. 797-819.  doi: 10.1899/10-140.1 Available Online

Cuffney, T.F., Bilger, M.D., and Haigler, A.M., 2007, Ambiguous taxa: effects on the characterization and interpretation of invertebrate assemblages: Journal of the North American Benthological Society, vol. 26, no. 2, p. 286-307.  doi: 10.1899/0887-3593(2007)26[286:ATEOTC]2.0.CO;2 Available Online

Crandall, C.A., Kauffman, L.J., Katz, B.G., Metz, P.A., McBride, W.S., and Berndt, M.P., 2009, Simulations of groundwater flow and particle tracking analysis in the area contributing recharge to a public-supply well near Tampa, Florida, 2002-05: U.S. Geological Survey Scientific Investigations Report 2008-5231, 53 p.  Available Online

Crandall, C.A., 2007, Hydrogeologic setting and ground-water flow simulations of the Northern Tampa Bay regional study area, Florida, Section 5 in Paschke, Suzanne S., ed., 2007, Hydrogeologic settings and ground-water flow simulations for regional studies of the transport of anthropogenic and natural contaminants to public-supply wells--studies begun in 2001: U.S. Geological Survey Professional Paper 1737-A, p. 5-1 to 5-29.  Available Online

Coupe, Richard H., 2007, Use of a watershed model to characterize the fate and transport of fluometuron, a soil-applied cotton herbicide, in surface water: International Journal of Environmental Analytical Chemistry, vol. 87, no. 13, p. 883-896.  doi: 10.1080/03067310701627819 Available Online

Coupe, R.H., 1998, Concentrations and loads of nitrogen and phosphorus in the Yazoo River, northwestern Mississippi, 1996-97: U.S. Geological Survey Water-Resources Investigations Report 98-4219, 17 p.  Available Online

Coles, J.F., Cuffney, T.F., McMahon, G., and Beaulieu, K.M., 2004, The effects of urbanization on the biological, physical, and chemical characteristics of coastal New England streams: U.S. Geological Survey Professional Paper 1695, 47 p.  Available Online

Clark, Gregory M., Mueller, David K., and Mast M. Alisa, 2000, Nutrient concentrations and yields in undeveloped stream basins of the United States: Journal of the American Water Resources Association, vol. 36, no. 4, August 2000, p. 849-860.  doi: 10.1111/j.1752-1688.2000.tb04311.x Available Online

Clark, Gregory M., and Ott, D.S., 1996, Springflow effects on chemical loads in the Snake River, south-central Idaho: Journal of the American Water Resources Association, vol. 32, no. 3, June 1996, p. 553-563.  doi: 10.1111/j.1752-1688.1996.tb04053.x Available Online

Clark, B.R., Landon, M.K., Kauffman, L.J., and Hornberger, G.Z., 2006, Simulation of solute movement through wellbores to characterize public supply well contaminant vulnerability in the High Plains Aquifer, York, Nebraska: International Ground Water Modeling Center: Modflow and More Conference, May 22-24, 2006, Golden, Colorado, 5 p.  Available Online

Clark, B.R., Landon, M.K., Kauffman, L.J., and Hornberger, G.Z., 2008, Simulations of ground-water flow, transport, age, and particle tracking near York, Nebraska, for a study of Transport of Anthropogenic and Natural Contaminants (TANC) to public-supply wells: U.S. Geological Survey Scientific Investigations Report 2007-5068, 47 p.  Available Online

Chapelle, F.H., Kauffman, L.J., Widdowson, M.A., 2014, Modeling the effects of naturally occurring organic carbon on chlorinated ethene transport to a public supply well: Groundwater,   doi: 10.1111/gwat.12152

Caskey, B.J., Justus, B.G., and Zappia, Humbert, 2002, Occurrence of invertebrates at 38 stream sites in the Mississippi Embayment study unit, 1996-99: U.S. Geological Survey Open-File Report 02-190, CD-ROM.  Available Online

Carpenter, Kurt D., and Waite, Ian R., 2000, Relations of habitat-specific algal assemblages to land use and water chemistry in the Willamette Basin, Oregon: Environmental Monitoring and Assessment, vol. 64, no. 1, p. 247-257.  doi: 10.1023/A:1006460802772 Available Online

Carlisle, Daren M., Falcone, James, Wolock, David M., Meador, Michael R., and Norris, Richard H., 2009, Predicting the natural flow regime: Models for assessing hydrological alteration in streams: River Research and Applications (2009), 17 p.  doi: 10.1002/rra.1247 Available Online

Carlisle, Daren M., Falcone, James, and Meador, Michael R., 2008, Predicting the biological condition of streams: use of geospatial indicators of natural and anthropogenic characteristics of watersheds: Environmental Monitoring and Assessment, 0167-6369 (Print) 1573-2959 (Online) May 21, 2008, p. 143-160.  doi: 10.1007/s10661-008-0256-z Available Online

Carlisle, D.M., Nelson, S.M., Eng, K., 2012, Macroinvertebrate community condition associated with the severity of streamflow alteration: River Research and Applications, online in advance of print, 11 p.  doi: 10.1002/rra.2626 Available Online

Carlisle, D.M., Meador, M.R., Moulton II, S.R., and Ruhl, P.M., 2007, Estimation and application of indicator values for common macroinvertebrate genera and families of the United States: Ecological Indicators, vol. 7, p. 22-33.  doi: 10.1016/j.ecolind.2005.09.005 Available Online

Carlisle, D.M., Hawkins, C.P., Meador, M.R., Potapova, M., and Falcone, J., 2008, Biological assessments of Appalachian streams based on predictive models for fish, macroinvertebrate, and diatom assemblages: Journal of the North American Benthological Society, vol. 27, p. 16-37.  doi: 10.1899/06-081.1 Available Online

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