Simulated Effects of Alterations to the Hydrologic System on the Distribution of Salinity in the Biscayne Aquifer in Broward County, Florida SIR 2016-5022 MODEL ARCHIVE ------------- Archive created: 2015-07-09 08:27:37.943000 Archive revised: 2016-02-22 Archive revised: 2016-02-23 File revised: 2016-03-07 Archive revised: 2016-03-18 File revised: 2016-03-22 --------------------------------------------------------------------------------- SIR2016-5022/ Description: ----------- The underlying directories contain all of the input and output files for the simulations described in the report, preprocessing python scripts and associated input data files for creating the sensitivity and scenarios runs, flopy source code, and SEAWAT (v4) source code. Descriptions of the data in each subdirectory are given to facilitate understanding of this model archive. Files descriptions are provided for select files to provide additional information that may be of use for understanding this model archive. The model simulations were run with a modified version of SEAWAT (v4). Modifications were limited to small changes to model output to facilitate post-processing of model results with python scripts. The source code has been included in the model archive. SEAWAT (v4) was compiled using the Intel Fortran Compiler for 64-bit operating systems. The model was run on the Windows Server 2008 HPC Edition (64-bit) operating system (Service Pack 1). Support is provided for correcting errors in the data release and clarification of the modeling conducted by the U.S. Geological Survey. Users are encouraged to review the complete model documentation report (http://dx.doi.org/10.3133/sir20165022) to understand the purpose, construction, and limitations of this model. Reconstructing the model archive from the online data release: ------------------------------------------------------------- The model archive is available as a data release from: http://dx.doi.org/10.5066/F7PV6HFR The models, along with pre- and post-processing tools, will run successfully only if the original directory structure is correctly restored. The model archive is broken into several pieces to reduce the likelyhood of download timeouts. Small files (readme.txt and modelgeoref.txt) are available as uncompressed files. All other files are zipped at the subdirectory level. For example, the files in the "georef" subdirectory are zipped into a zip file named "georef.zip". All zip files should be unzipped into a directory with the same name as the zip file name without the .zip extension. The "calibration.zip", "model.misc.zip", "external_files.zip", and all zip files starting with "scen" and "sensi" should be unzipped in the same manner as the other zip files but should be placed within a "model" subdirectory created at the same level as the "georef" subdirectory. Similarly, the zip files with names starting with "output" should be unzipped in the same manner as other zip files but should be placed within a "output" subdirectory created at the same level as the "georef" subdirectory created from "georef.zip". The highest-level directory structure of the original model archive is: SIR2016-5022/ ancillary/ bin/ georef/ model/ output/ source/ The full directory structure of the model archive and the files within each subdirectory are listed below. Running the model(s): -------------------- Several python scripts have been included in the model archive to run the history-matching simulation, the sensitivity simulations, and scenario simulations. These scripts will work with the standard version of python (version 2.7). The scripts are in the the model subdirectory and are titled: runCalibration.py runSensitivity.py runScenarios.py To use these python scripts open a command line/terminal in the model subdirectory and type: python runCalibration.py to run the history-matching simulation or python runSensitivity.py to run the three (3) sensitivity simulations or python runScenarios.py to run the seven (7) scenario simulations. All of the python scripts run the SEAWAT version 4 executable in the model subdirectory, move the output files to the appropriate subdirectories, and create a summary file, with the same name as the script with the *.out file extension, that summarizes the operations performed by the script. The simulations can also be run without the python scripts by opening a command line/terminal in the model/calibration/ subdirectory and typing: ../../bin/swt_v4x64.exe brow.cs.nam to run history-matching simulation. The other simulations can be run in a similar fashion by replacing "brow.cs.nam" with the appropriate sensitivity or scenario simulation SEAWAT name files and running from the appropriate subdirectory in the model/ subdirectory (for example, run scenario 5 (brow.cs.scen05.nam) from the model/scen05/ subdirectory). Possible name files are: 1. brow.cs.nam 2. brow.cs.sensi.nochange.nam 3. brow.cs.sensi.nowell.nam 4. brow.cs.sensi.nowell.nochange.nam 5. brow.cs.scen01.nam 6. brow.cs.scen02.nam 7. brow.cs.scen03.nam 8. brow.cs.scen04.nam 9. brow.cs.scen05.nam 10. brow.cs.scen06.nam 11. brow.cs.scen07.nam The output from the history-matching, sensitivity, and scenario simulations all have the same name. Results after running a simulation should be moved to an appropriate output directory. The files that should be moved include: 1. MT3D001.OBS 2. MT3D001.UCN 3. MT3D.CNF 4. MT3D001.MAS 5. seawat_hyd.bin 6. seawat.cbc 7. seawat.hds 8. seawat.ddn 9. seawat.list 10. seawat_drt.cbc 11. seawat_ets.cbc 12. seawat_ghb.cbc 13. seawat_rch.cbc 14. seawat_wel.cbc The cell-by-cell flow output files (files 6, and 10-14) are not used by any of the post-processing scripts so do not need to be moved to the appropriate output directory and can be deleted. Furthermore, cell-by-cell flow results are not presented in the model documentation report. As a result, the cell-by-cell files have not been included in the archive to reduce the size of the model archive and the size of output download files. Files: ----- readme.txt : This file which documents the structure of the model archive. modelgeoref.txt : ASCII file with the four corners of the model domain. Model data files are in the NAD 1983 StatePlane Florida East FIPS_0901_Feet projection. Both latitude, longitude and state plane coordinates are provided. ancillary/ Description: ----------- This directory contains a ancillary data including directories with python scripts for generating sensitivity (brow.cs.sensi.build) and scenario (brow.cs.scenarios.build) model input files. The directory also includes GIS data used to generate figures and sensitivity and scenario datasets. Files: ----- None brow.cs.scenarios.build/ Description: ----------- Python scripts to build boundary condition data for the scenarios. Command line arguments are used to specify which scenario package to build. Files: ----- AbandonedWells.txt : Text file that is used to define which wells are abandoned in the scenario simulations. bro.py : generic classes that define key aspects of the model files in this model archive. For example, the number of layers, rows, and columns in the model and the x- and y-offset of the model are defined in this file brow.cs.scenarios.btn.timprs.py : Creates btn timprs data for scenarios brow.cs.scenarios.drt.py : Creates drain (drn) package data brow.cs.scenarios.ets.py : Creates evapotranspiration (evt) package data brow.cs.scenarios.ghbs.py : Creates general-head boundary (ghb) package data brow.cs.scenarios.rch.py : Creates recharge (rch) package data brow.cs.scenarios.riv.py : Creates river (riv) package data brow.cs.scenarios.sealevelfig.py : Creates sea-level change figure in model report. brow.cs.scenarios.ssm.py : Create source-sink mixing (ssm) package data brow.cs.scenarios.startvals.py : Create scenario starting heads and concentrations from history- matching simulation results brow.cs.scenarios.well.py : Create well (wel) package data btn.perlen.out : MT3D btn package scenario perlen data btn.timprs.out : MT3D btn package scenario timprs data build.rchwell.data.py : Create recharge well data for scenario 7 build.scenario.datasets.log : Summary log file from build.scenario.datasets.py script build.scenario.datasets.py : Python script that creates additional datasets for all scenario simulations dis.perlen.out : MODFLOW dis package perlen data PermittedWellFieldRates.txt : Text file that is used to define permitted pumping rates for each well field. scenario.wellaux2wellfield.txt : Defines the relation of well name to specific well field for the scenarios UniqueWellFields.txt : List of unique well fields in the model domain. analysis/ Description: ----------- Summary tables that calculates monthly and annual pumping rates for each well in a well field for the 2007-2011 period and for each different groundwater pumpage data set used in the scenarios. Files: ----- 2007-2011_WellfieldPumpage.txt : Scenario_base_WellfieldPumpage.txt : Scenario_permitted_rechargewells_WellfieldPumpage.txt : Scenario_permitted_WellfieldPumpage.txt : data/ Description: ----------- Data used to create scenario boundary condition data. Files: ----- BCDPEP_reach_conc.dat : G54MoveReaches.txt : ghb_NS_factors.dat : ghb_NS_stages_model.csv : HallandaleRechargeWells.csv : HallandaleRechargeWells.seawat.csv : noaa/ Description: ----------- Data used to define chd, ghb, and riv packages for the different sea-level conditions evaluted in the model scenarios. Files: ----- noaa_sp.smp : VAKey_CurrentRate.smp : VAKey_HighRate.smp : VAKey_LowRate.smp : VAKey_MediumRate.smp : VAKey_NoChange.smp : SeaLevelPrediction/ Description: ----------- PEST bore sample and ASCII time-series files used to calculate chd, ghb, and riv packages for the different sea-level conditions evaluted in the model scenarios. Files: ----- Simulation Time Series.png : Time-series showing the different components used to calculate the base scenario sea-level VAKey.smp : VAKey50yearTidePredictionMonthly.py : Python script to create the PEST bore sample and ASCII time-series files for the scenarios. VAKeyTidalData_1996-2025.smp : VAKey_CurrentRate.smp : VAKey_CurrentRate_SWR1.ref : VAKey_HighRate.smp : VAKey_HighRate_SWR1.ref : VAKey_LowRate.smp : VAKey_LowRate_SWR1.ref : VAKey_MedRate.smp : VAKey_MedRate_SWR1.ref : VAKey_Observed, 2011.smp : VAKey_Observed, 2011_SWR1.ref : stage_smp_full/ Description: ----------- Monthly average EDEN stage data along the western model boundary in the Water Conservation Areas. Files: ----- 124015.smp : Monthly average stage in EDEN cell 124015 124016.smp : 124390.smp : 124391.smp : 124765.smp : 125140.smp : 125515.smp : 125890.smp : 126265.smp : 126640.smp : 127015.smp : 127390.smp : 127765.smp : 128140.smp : 128515.smp : 128890.smp : 129265.smp : 129640.smp : 130015.smp : 130389.smp : 130390.smp : 130764.smp : 130765.smp : 131139.smp : 131140.smp : 131514.smp : 131515.smp : 131889.smp : 131890.smp : 132264.smp : 132265.smp : 132639.smp : 132640.smp : 133014.smp : 133015.smp : 133389.smp : 133390.smp : 133764.smp : 133765.smp : 134139.smp : 134140.smp : 134514.smp : 134515.smp : 134889.smp : 134890.smp : 135264.smp : 135265.smp : 135639.smp : 135640.smp : 136014.smp : 136015.smp : 136389.smp : 136390.smp : 136764.smp : 136765.smp : 137139.smp : 137140.smp : 137514.smp : 137515.smp : 137889.smp : 137890.smp : 138264.smp : 138265.smp : 138639.smp : 138640.smp : 139014.smp : 139015.smp : 139389.smp : 139390.smp : 139764.smp : 139765.smp : 140139.smp : 140140.smp : 140514.smp : 140515.smp : 140889.smp : 140890.smp : 141264.smp : 141265.smp : 141639.smp : 141640.smp : 142014.smp : 142015.smp : 142389.smp : 142390.smp : 142764.smp : 143138.smp : 143139.smp : 143513.smp : 143514.smp : 143888.smp : 143889.smp : 143909.smp : 143910.smp : 144263.smp : 144264.smp : 144281.smp : 144282.smp : 144283.smp : 144284.smp : 144285.smp : 144637.smp : 144638.smp : 144639.smp : 144652.smp : 144653.smp : 144654.smp : 144655.smp : 144656.smp : 144657.smp : 144658.smp : 144659.smp : 144660.smp : 144661.smp : 145012.smp : 145013.smp : 145023.smp : 145024.smp : 145025.smp : 145026.smp : 145027.smp : 145028.smp : 145029.smp : 145030.smp : 145035.smp : 145036.smp : 145037.smp : 145038.smp : 145387.smp : 145388.smp : 145395.smp : 145396.smp : 145397.smp : 145398.smp : 145399.smp : 145400.smp : 145401.smp : 145411.smp : 145412.smp : 145413.smp : 145762.smp : 145763.smp : 145764.smp : 145765.smp : 145766.smp : 145767.smp : 145768.smp : 145769.smp : 145770.smp : 145771.smp : 145772.smp : 145773.smp : 145787.smp : 145788.smp : 145789.smp : 146137.smp : 146138.smp : 146139.smp : 146140.smp : 146141.smp : 146142.smp : 146143.smp : 146144.smp : 146163.smp : 146164.smp : 146165.smp : 146166.smp : 146539.smp : 146540.smp : 146541.smp : 146915.smp : 146916.smp : 146917.smp : 146918.smp : 147291.smp : 147292.smp : 147293.smp : 147667.smp : 147668.smp : 147669.smp : 148044.smp : 148045.smp : 148419.smp : 148420.smp : 148421.smp : 148794.smp : 148795.smp : 148796.smp : 148797.smp : 149172.smp : 149173.smp : 149174.smp : 149547.smp : 149548.smp : 149549.smp : 149923.smp : 149924.smp : 149925.smp : 149926.smp : 150298.smp : 150299.smp : 150300.smp : 150301.smp : 150676.smp : 151051.smp : 151426.smp : 151801.smp : 152176.smp : 152551.smp : 152925.smp : 152926.smp : 153300.smp : 153301.smp : 153675.smp : 153676.smp : 154050.smp : 154051.smp : 154425.smp : 154426.smp : 154800.smp : 154801.smp : 155175.smp : 155176.smp : 155550.smp : 155551.smp : 155925.smp : 155926.smp : 156300.smp : 156301.smp : 156675.smp : 156676.smp : 157050.smp : 157051.smp : 157425.smp : 157426.smp : 157800.smp : 157801.smp : 158175.smp : 158176.smp : 158550.smp : 158551.smp : 158925.smp : 158926.smp : 159300.smp : 159301.smp : 159675.smp : 159676.smp : 160050.smp : 160051.smp : 160425.smp : 160426.smp : 160800.smp : 160801.smp : 161175.smp : 161176.smp : 161550.smp : 161551.smp : 161925.smp : 161926.smp : 162300.smp : 162301.smp : 162675.smp : 162676.smp : 163050.smp : 163051.smp : 163425.smp : 163426.smp : 163800.smp : 163801.smp : 164175.smp : 164176.smp : 164550.smp : 164551.smp : 164925.smp : 164926.smp : 165300.smp : 165301.smp : 165675.smp : 165676.smp : 166050.smp : 166051.smp : 166425.smp : 166426.smp : 166800.smp : 166801.smp : 167175.smp : 167176.smp : 167550.smp : 167551.smp : 167552.smp : 167925.smp : 167926.smp : 167927.smp : 167928.smp : 168302.smp : 168303.smp : 168304.smp : 168679.smp : 168680.smp : 168681.smp : 168682.smp : 168683.smp : 168684.smp : 168685.smp : 168686.smp : 168687.smp : 168688.smp : 169062.smp : 169063.smp : 169064.smp : 169438.smp : 169439.smp : 169814.smp : 169815.smp : 170190.smp : 170191.smp : 170565.smp : 170566.smp : 170567.smp : 170941.smp : 170942.smp : 171316.smp : 171317.smp : 171691.smp : 171692.smp : 172066.smp : 172067.smp : 172441.smp : 172442.smp : 172816.smp : 172817.smp : 173191.smp : 173192.smp : 173566.smp : 173567.smp : 173941.smp : 173942.smp : 174317.smp : 174692.smp : 174693.smp : 175067.smp : 175068.smp : 175442.smp : 175443.smp : 175817.smp : 175818.smp : 176193.smp : 176568.smp : 176569.smp : 176943.smp : 176944.smp : 177318.smp : 177319.smp : 177693.smp : 177694.smp : 177695.smp : 178069.smp : 178070.smp : 178444.smp : 178445.smp : 178819.smp : 178820.smp : 179195.smp : 179570.smp : 179945.smp : 180320.smp : 180695.smp : 181070.smp : Monthly average stage in EDEN cell 181070 Figures/ Description: ----------- Time-series showing groundwater pumpage and historic and scenario tidal data used in the model simulations and included in the model report. Files: ----- BrowardCountySaltwaterActiveScenarioPumpage.pdf : HistoricTides.pdf : ScenarioTides.pdf : brow.cs.sensi.build/ Description: ----------- Python scripts to build boundary condition data for the ssensitivity simulationss. Command line argument are used to specify which sensitivity package to build. Files: ----- bro.py : generic classes that define key aspects of the model files in this model archive. For example, the number of layers, rows, and columns in the model and the x- and y-offset of the model are defined in this file brow.cs.sensi.ghbs.py : Python script to create general- head boundary (ghb) package data brow.cs.sensi.riv.py : Python script to create river (riv) package data brow.cs.sensi.ssm.py : Python script to create source-sink (ssm) package data build.sensi.datasets.log : Summary log file from build.sensi.datasets.py script build.sensi.datasets.py : Python script that creates additional datasets required for all sensitivity simulations data/ Description: ----------- Data used to create sensitivity simulation boundary condition data. Files: ----- BCDPEP_reach_conc.dat : G54MoveReaches.txt : ghb_NS_factors.dat : ghb_NS_stages_model.csv : RechargeWellScenarioLocations.txt : noaa/ Description: ----------- Data used to define chd, ghb, and riv packages for the no sea-level change condition evaluted in the sensitivity simulations. Files: ----- noaa_sp.smp : noaa_sp_detrended_acoe.smp : noaa_sp_nochange.smp : stage_smp_full/ Description: ----------- Monthly average EDEN stage data along the western model boundary in the Water Conservation Areas. Files: ----- 124015.smp : Monthly average stage in EDEN cell 124015 124016.smp : 124390.smp : 124391.smp : 124765.smp : 125140.smp : 125515.smp : 125890.smp : 126265.smp : 126640.smp : 127015.smp : 127390.smp : 127765.smp : 128140.smp : 128515.smp : 128890.smp : 129265.smp : 129640.smp : 130015.smp : 130389.smp : 130390.smp : 130764.smp : 130765.smp : 131139.smp : 131140.smp : 131514.smp : 131515.smp : 131889.smp : 131890.smp : 132264.smp : 132265.smp : 132639.smp : 132640.smp : 133014.smp : 133015.smp : 133389.smp : 133390.smp : 133764.smp : 133765.smp : 134139.smp : 134140.smp : 134514.smp : 134515.smp : 134889.smp : 134890.smp : 135264.smp : 135265.smp : 135639.smp : 135640.smp : 136014.smp : 136015.smp : 136389.smp : 136390.smp : 136764.smp : 136765.smp : 137139.smp : 137140.smp : 137514.smp : 137515.smp : 137889.smp : 137890.smp : 138264.smp : 138265.smp : 138639.smp : 138640.smp : 139014.smp : 139015.smp : 139389.smp : 139390.smp : 139764.smp : 139765.smp : 140139.smp : 140140.smp : 140514.smp : 140515.smp : 140889.smp : 140890.smp : 141264.smp : 141265.smp : 141639.smp : 141640.smp : 142014.smp : 142015.smp : 142389.smp : 142390.smp : 142764.smp : 143138.smp : 143139.smp : 143513.smp : 143514.smp : 143888.smp : 143889.smp : 143909.smp : 143910.smp : 144263.smp : 144264.smp : 144281.smp : 144282.smp : 144283.smp : 144284.smp : 144285.smp : 144637.smp : 144638.smp : 144639.smp : 144652.smp : 144653.smp : 144654.smp : 144655.smp : 144656.smp : 144657.smp : 144658.smp : 144659.smp : 144660.smp : 144661.smp : 145012.smp : 145013.smp : 145023.smp : 145024.smp : 145025.smp : 145026.smp : 145027.smp : 145028.smp : 145029.smp : 145030.smp : 145035.smp : 145036.smp : 145037.smp : 145038.smp : 145387.smp : 145388.smp : 145395.smp : 145396.smp : 145397.smp : 145398.smp : 145399.smp : 145400.smp : 145401.smp : 145411.smp : 145412.smp : 145413.smp : 145762.smp : 145763.smp : 145764.smp : 145765.smp : 145766.smp : 145767.smp : 145768.smp : 145769.smp : 145770.smp : 145771.smp : 145772.smp : 145773.smp : 145787.smp : 145788.smp : 145789.smp : 146137.smp : 146138.smp : 146139.smp : 146140.smp : 146141.smp : 146142.smp : 146143.smp : 146144.smp : 146163.smp : 146164.smp : 146165.smp : 146166.smp : 146539.smp : 146540.smp : 146541.smp : 146915.smp : 146916.smp : 146917.smp : 146918.smp : 147291.smp : 147292.smp : 147293.smp : 147667.smp : 147668.smp : 147669.smp : 148044.smp : 148045.smp : 148419.smp : 148420.smp : 148421.smp : 148794.smp : 148795.smp : 148796.smp : 148797.smp : 149172.smp : 149173.smp : 149174.smp : 149547.smp : 149548.smp : 149549.smp : 149923.smp : 149924.smp : 149925.smp : 149926.smp : 150298.smp : 150299.smp : 150300.smp : 150301.smp : 150676.smp : 151051.smp : 151426.smp : 151801.smp : 152176.smp : 152551.smp : 152925.smp : 152926.smp : 153300.smp : 153301.smp : 153675.smp : 153676.smp : 154050.smp : 154051.smp : 154425.smp : 154426.smp : 154800.smp : 154801.smp : 155175.smp : 155176.smp : 155550.smp : 155551.smp : 155925.smp : 155926.smp : 156300.smp : 156301.smp : 156675.smp : 156676.smp : 157050.smp : 157051.smp : 157425.smp : 157426.smp : 157800.smp : 157801.smp : 158175.smp : 158176.smp : 158550.smp : 158551.smp : 158925.smp : 158926.smp : 159300.smp : 159301.smp : 159675.smp : 159676.smp : 160050.smp : 160051.smp : 160425.smp : 160426.smp : 160800.smp : 160801.smp : 161175.smp : 161176.smp : 161550.smp : 161551.smp : 161925.smp : 161926.smp : 162300.smp : 162301.smp : 162675.smp : 162676.smp : 163050.smp : 163051.smp : 163425.smp : 163426.smp : 163800.smp : 163801.smp : 164175.smp : 164176.smp : 164550.smp : 164551.smp : 164925.smp : 164926.smp : 165300.smp : 165301.smp : 165675.smp : 165676.smp : 166050.smp : 166051.smp : 166425.smp : 166426.smp : 166800.smp : 166801.smp : 167175.smp : 167176.smp : 167550.smp : 167551.smp : 167552.smp : 167925.smp : 167926.smp : 167927.smp : 167928.smp : 168302.smp : 168303.smp : 168304.smp : 168679.smp : 168680.smp : 168681.smp : 168682.smp : 168683.smp : 168684.smp : 168685.smp : 168686.smp : 168687.smp : 168688.smp : 169062.smp : 169063.smp : 169064.smp : 169438.smp : 169439.smp : 169814.smp : 169815.smp : 170190.smp : 170191.smp : 170565.smp : 170566.smp : 170567.smp : 170941.smp : 170942.smp : 171316.smp : 171317.smp : 171691.smp : 171692.smp : 172066.smp : 172067.smp : 172441.smp : 172442.smp : 172816.smp : 172817.smp : 173191.smp : 173192.smp : 173566.smp : 173567.smp : 173941.smp : 173942.smp : 174317.smp : 174692.smp : 174693.smp : 175067.smp : 175068.smp : 175442.smp : 175443.smp : 175817.smp : 175818.smp : 176193.smp : 176568.smp : 176569.smp : 176943.smp : 176944.smp : 177318.smp : 177319.smp : 177693.smp : 177694.smp : 177695.smp : 178069.smp : 178070.smp : 178444.smp : 178445.smp : 178819.smp : 178820.smp : 179195.smp : 179570.smp : 179945.smp : 180320.smp : 180695.smp : 181070.smp : Monthly average stage in EDEN cell 181070 gis/ Description: ----------- ESRI shapefiles used (1) in pre-processing scripts to create boundary condition data for sensitivity and scenario simulations and (2) in post-procession to add geo-referenced features on map figures or extract data along defined cross-section lines. Files: ----- sw_reaches_conn_SWRpolylines_2.dbf : sw_reaches_conn_SWRpolylines_2.prj : sw_reaches_conn_SWRpolylines_2.sbn : sw_reaches_conn_SWRpolylines_2.sbx : sw_reaches_conn_SWRpolylines_2.shp : sw_reaches_conn_SWRpolylines_2.shp.xml : sw_reaches_conn_SWRpolylines_2.shx : BrowardCSCrossSections.dbf : BrowardCSCrossSections.prj : BrowardCSCrossSections.sbn : BrowardCSCrossSections.sbx : BrowardCSCrossSections.shp : BrowardCSCrossSections.shp.xml : BrowardCSCrossSections.shx : BrowardCSGeoCrossSections.dbf : BrowardCSGeoCrossSections.prj : BrowardCSGeoCrossSections.sbn : BrowardCSGeoCrossSections.sbx : BrowardCSGeoCrossSections.shp : BrowardCSGeoCrossSections.shp.xml : BrowardCSGeoCrossSections.shx : BrowardCSSWICrossSections.dbf : BrowardCSSWICrossSections.prj : BrowardCSSWICrossSections.sbn : BrowardCSSWICrossSections.sbx : BrowardCSSWICrossSections.shp : BrowardCSSWICrossSections.shp.xml : BrowardCSSWICrossSections.shx : BrowardCSSWISourceCrossSections.dbf : BrowardCSSWISourceCrossSections.prj : BrowardCSSWISourceCrossSections.sbn : BrowardCSSWISourceCrossSections.sbx : BrowardCSSWISourceCrossSections.shp : BrowardCSSWISourceCrossSections.shp.xml : BrowardCSSWISourceCrossSections.shx : broward_grid_eden.dbf : broward_grid_eden.shp : broward_grid_eden.shx : broward_grid_master.dbf : broward_grid_master.prj : broward_grid_master.sbn : broward_grid_master.sbx : broward_grid_master.shp : broward_grid_master.shp.xml : broward_grid_master.shx : HallandaleRechargeWells.dbf : HallandaleRechargeWells.prj : HallandaleRechargeWells.sbn : HallandaleRechargeWells.sbx : HallandaleRechargeWells.shp : HallandaleRechargeWells.shx : pws_combine.dbf : pws_combine.prj : pws_combine.sbn : pws_combine.sbx : pws_combine.shp : pws_combine.shp.xml : pws_combine.shx : SalinityObs.dbf : SalinityObs.prj : SalinityObs.sbn : SalinityObs.sbx : SalinityObs.shp : SalinityObs.shp.xml : SalinityObs.shx : SalinityObs_latlon.dbf : SalinityObs_latlon.prj : SalinityObs_latlon.sbn : SalinityObs_latlon.sbx : SalinityObs_latlon.shp : SalinityObs_latlon.shp.xml : SalinityObs_latlon.shx : SalinityStructures_focus_latlon.dbf : SalinityStructures_focus_latlon.prj : SalinityStructures_focus_latlon.sbn : SalinityStructures_focus_latlon.sbx : SalinityStructures_focus_latlon.shp : SalinityStructures_focus_latlon.shp.xml : SalinityStructures_focus_latlon.shx : SFWMD_SWI_latlon.dbf : SFWMD_SWI_latlon.prj : SFWMD_SWI_latlon.sbn : SFWMD_SWI_latlon.sbx : SFWMD_SWI_latlon.shp : SFWMD_SWI_latlon.shx : StateRoads_latlon.dbf : StateRoads_latlon.prj : StateRoads_latlon.sbn : StateRoads_latlon.sbx : StateRoads_latlon.shp : StateRoads_latlon.shp.xml : StateRoads_latlon.shx : wellfield_polyg.dbf : wellfield_polyg.prj : wellfield_polyg.sbn : wellfield_polyg.sbx : wellfield_polyg.shp : wellfield_polyg.shx : wellfield_polyg_latlon.dbf : wellfield_polyg_latlon.prj : wellfield_polyg_latlon.sbn : wellfield_polyg_latlon.sbx : wellfield_polyg_latlon.shp : wellfield_polyg_latlon.shx : bin/ Description: ----------- This directory contains the 64-bit executable used to run the history matching simulation, the 3 sensitivity simulations, and the 7 scenario simulations documented in the report. doi: 10.3133/sir20165022 Files: ----- swt_v4x64.exe : SEAWAT (v4) 64-bit windows executable georef/ Description: ----------- This directory a shapefile defining the active and inactive areas of the model documented in the report. doi: 10.3133/sir20165022 Files: ----- SIR2016_5022.dbf : SIR2016_5022.dbf is part of the SIR2016_5022 shapefile SIR2016_5022.prj : SIR2016_5022.prj is part of the SIR2016_5022 shapefile SIR2016_5022.shp : SIR2016_5022.shp is part of the SIR2016_5022 shapefile SIR2016_5022.shx : SIR2016_5022.shx is part of the SIR2016_5022 shapefile model/ Description: ----------- This directory contains contains all of the input files for the history matching run, the 3 sensitivity runs, and the 7 scenario runs documented in the report. doi: 10.3133/sir20165022 Files: ----- runCalibration.out : summary output from the runCalibration python script runCalibration.py : python script to run the history matching model and move the results to the history matching results folder runScenarios.out : summary output from the runScenarios python script runScenarios.py : python script to run the 7 model scenarios documented in the report and move the scenario results to the scenario results folders runSensitivity.out : summary output from the runSensitivity python script runSensitivity.py : python script to run the model sensitivity runs documented in the report and move the sensitivity results to the sensitivity results folders calibration/ Description: ----------- This directory contains contains the history matching name file used to make the history matching run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.nam : SEAWAT (v4) name file - history matching usgs.model.reference : temporal and spatial reference for the history matching model. external_files/ Description: ----------- This directory contains contains external files used by the models documented in the report. doi: 10.3133/sir20165022 Files: ----- flow.riv : SEAWAT (v4) river boundary file - history matching seawat.adv : SEAWAT (v4) advection package file seawat.bas : SEAWAT (v4) basic package file seawat.btn : SEAWAT (v4) basic transport package file seawat.chd : SEAWAT (v4) Time-Variant Specified-Head (chd) package file seawat.dis : SEAWAT (v4) discretization package file seawat.drt : SEAWAT (v4) drain package file seawat.dsp : SEAWAT (v4) dispersion package file seawat.evt : SEAWAT (v4) evapotranspiration package file seawat.gcg : SEAWAT (v4) general conjugate gradient solver package file seawat.ghb : SEAWAT (v4) general head boundary package file seawat.hyd : SEAWAT (v4) hydmod package file seawat.lpf : SEAWAT (v4) layer property flow package file seawat.pcg : SEAWAT (v4) preconditioned conjugate gradient solver file seawat.rch : SEAWAT (v4) recharge package file seawat.scenario.bas : SEAWAT (v4) basic package file for the scenario simulations (scenarios 1-7) seawat.scenario.btn : SEAWAT (v4) basic transport file for the scenario simulations (scenarios 1-7) seawat.scenario.dis : SEAWAT (v4) discretization package file for the scenario simulations (scenarios 1-7) seawat.scenario.drt : SEAWAT (v4) drain package file for the scenario simulations (scenarios 1-7) seawat.scenario.evt : SEAWAT (v4) evapotranspiration package file for the scenario simulations (scenarios 1-7) seawat.scenario.MoveG54.ssm : SEAWAT (v4) source sink mixing package file for scenario 6 seawat.scenario.rch : SEAWAT (v4) recharge package file for the scenario simulations (scenarios 1-7) seawat.scenario.rechargewells.ssm : SEAWAT (v4) source sink mixing package file for scenario 7 seawat.sensi.nowell.ssm : SEAWAT (v4) source sink mixing package file for the no groundwater pumpage sensitivity run seawat.ssm : SEAWAT (v4) source sink mixing package file seawat.vdf : SEAWAT (v4) variable density flow package file seawat.wel : SEAWAT (v4) well package file seawat_base.wel : SEAWAT (v4) well package file for scenario 1 seawat_base_high.chd : SEAWAT (v4) Time-Variant Specified-Head (chd) package file for the high rate of sea-level change and used in scenarios 5, 6, and 7 seawat_base_high.ghb : SEAWAT (v4) general head boundary (ghb) package file for the high rate of sea-level change and used in scenarios 5, 6, and 7 seawat_base_low.chd : SEAWAT (v4) Time-Variant Specified-Head (chd) (chd) package file for the low rate of sea-level change and used in scenario 3 seawat_base_low.ghb : SEAWAT (v4) general head boundary (ghb) package file for the low rate of sea-level change and used in scenarios 3 seawat_base_medium.chd : SEAWAT (v4) Time-Variant Specified-Head (chd) package file for the medium rate of sea-level change and used in scenario 4 seawat_base_medium.ghb : SEAWAT (v4) general head boundary (ghb) package file for the medium rate of sea- level change and used in scenarios 4 seawat_base_nochange.chd : SEAWAT (v4) Time-Variant Specified-Head (chd) package file for the no sea- level change and used in scenarios 1 and 2. seawat_base_nochange.ghb : SEAWAT (v4) general head boundary (ghb) package file for the no sea- level change and used in scenarios 1 and 2. seawat_derv.adv : SEAWAT (v4) advection package file seawat_derv.vdf : SEAWAT (v4) variable density flow package file seawat_full.oc : SEAWAT (v4) output control package file seawat_high.riv : SEAWAT (v4) river boundary (riv) package file for the high rate of sea-level change and used in scenarios 5, 6, and 7 seawat_high_MoveG54.riv : seawat_low.riv : SEAWAT (v4) river boundary (riv) package file for the low rate of sea-level change and used in scenario 3 seawat_medium.riv : SEAWAT (v4) river boundary (riv) package file for the medium rate of sea-level change and used in scenario 4 seawat_nochange.riv : SEAWAT (v4) river boundary (riv) package file for the no sea-level change and used in scenarios 1 and 2 seawat_permitted.wel : SEAWAT (v4) well boundary (wel) package file with permitted rates and used in used in scenarios 2, 3, 4, 5, and 6. seawat_permitted_rechargewells.wel : SEAWAT (v4) well boundary (wel) package file with permitted rates and Hallandale recharge wells and used in scenario 7. seawat_sensi_nochange.chd : SEAWAT (v4) Time-Variant Specified- Head (chd) package file representing no change in sea-level during the period from 1/1950 through 5/2012. seawat_sensi_nochange.ghb : SEAWAT (v4) General-Head Boundary (ghb) package file representing no change in sea-level during the period from 1/1950 through 5/2012. seawat_sensi_nochange.riv : SEAWAT (v4) river boundary (riv) package file representing no change in sea-level during the period from 1/1950 through 5/2012. flowref/ Description: ----------- Directory containing two-dimensional MODFLOW-based array files used in by the SEAWAT models contained in this archive. Files: ----- top_mod.ref : Two-dimensional array defining the top of the model. Used by the evt packages. ets/ Description: ----------- Directory containing evapotranspiration data for the EVT package files. Files: ----- ets_SP_YYYYMMDD.ref : Two-dimensional array files containing potential evapotranspiration rate for stess period SP corresponding to month MM, day DD, and year YYYY exdp.ref : extinction depth array file rch/ Description: ----------- Directory containing recharge (rainfall) data for the RCH paackage files. Files: ----- rch_SP_YYYYMMDD.ref : two-dimension array files containing recharge rate for stess period SP corresponding to month MM, day DD, and year YYYY misc/ Description: ----------- Files the define the layer, row, column location of observation wells in the model domain. Also included are files that tie production wells to specific well fields, and groundwater withdrawal rates for production wells. Files: ----- btn_obs.key : conc_wells.key : head_wells.key : scenario.wellfield.key : seawat_well_dataframe.csv : plots/ Description: ----------- Post-processed model input figures. Modified versions of many of these figures have been included in the model report. These figures were created using the python post-processing scripts included in the model/external_files/python subdirectory. Files: ----- None properties/ Description: ----------- Maps showing select model properties and layer bottom elevations. Files: ----- FigA-03_LSE.pdf : FigA-04_Lay01Bot.pdf : FigA-05a_Lay02Bot.pdf : FigA-05b_Lay06Bot.pdf : FigA-05c_Lay10Bot.pdf : FigA-06a_Lay11Bot.pdf : FigA-06b_Lay12Bot.pdf : FigA-07a_BAProdThick.pdf : FigA-07b_WTThick.pdf : FigA-15_EXDP2010.pdf : FigA-17A_KhUPR.pdf : FigA-17B_KvUPR.pdf : FigA-18A_KhPD1.pdf : FigA-18B_KvPD1.pdf : FigA-19A_KhPD2.pdf : FigA-19B_KvPD2.pdf : FigA-20A_KhLWR.pdf : FigA-20B_KvLWR.pdf : FigA-21_SyUPR.pdf : FigA-22A_SsUPR.pdf : FigA-22B_SsPRD.pdf : FigA-22C_SsLWR.pdf : FigA-23A_PorosityUPR.pdf : FigA-23B_PorosityPD1.pdf : FigA-23C_PorosityPD2.pdf : FigA-23D_PorosityLWR.pdf : icbund_1.pdf : Top-WT.pdf : rainfall/ Description: ----------- Time-series figure showing average rainfall depth applied in the active portion of the model. Deviations from average rainfall for the period from 1950 through 2012 and 1981 through 2010 is also shown. Files: ----- BrowardCountyRainfallRate.pdf : BrowardCountyRainfallRETRate.pdf : xsect/ Description: ----------- Figure showing geologic cross sections. Files: ----- FigA-09GeoXSect.pdf : python/ Description: ----------- Pre-processing python scripts used to generate model related figures included in the model documentation report. The pre-processing python scripts rely on the flopy and cluster_repo python packages included in the source directory. flopy requires NumPy 1.9 (or higher) and matplotlib 1.4 (or higher). The mapping and cross-section capabilities in the flopy.plot submodule require Pyshp 1.2 (or higher). The cluster_repo python package has also been included because several of the python pre- and post-processing scripts use the functionality in classes and methods. In particular, the classes and methods in shapefile.py and pestUtil.py are used. cluster_repo requires NumPy 1.9 or higher and pandas 0.15.2 or higher. The pre-processing mapping scripts also require Basemap 1.0.7 or higher. Files: ----- bro.py : generic classes that define key aspects of the model files in this model archive. For example, the number of layers, rows, and columns in the model and the x- and y-offset of the model are defined in this file bro_map_plot.py : generic functionality for plotting map data as presented in the report. PlotAllModel.out : Summary output from PlotAllModel.py PlotAllModel .py : Python script to plot all results included in the model/external_files/plots/ subdirectory. PlotGeoCrossSections.py : PlotProperties.py : PlotRainfallData.py : PlotRainfallRETData.py : seawatlist/ Description: ----------- Boundary condition list files for chd, ghb, and wel package files used for the history matching simulation Files: ----- chd_YYYYMMDD.dat : Time-Variant Specified-Head (chd) package list files corresponding to month MM, day DD, and year YYYY. drt_YYYYMMDD.dat : Drain (drn) package list files corresponding to month MM, day DD, and year YYYY. ghb_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY. wel_YYYYMMDD.dat : Well (wel) package list files corresponding to month MM, day DD, and year YYYY. seawatlist.scenarios/ Description: ----------- Boundary condition list files for chd, drn, ghb, riv, and wel package files used for the scenario simulations Files: ----- None chd_base_high/ Description: ----------- Time-Variant Specified-Head (chd) package list files for the high rate of sea-level change and used in scenarios 5, 6, and 7. Files: ----- chd_base_high_YYYYMMDD.dat : Time-Variant Specified-Head (chd) package list files corresponding to month MM, day DD, and year YYYY. chd_base_low/ Description: ----------- Time-Variant Specified-Head (chd) package list files for the low rate of sea-level change and used in scenario 3. Files: ----- chd_base_low_YYYYMMDD.dat : Time-Variant Specified-Head (chd) package list files corresponding to month MM, day DD, and year YYYY. chd_base_medium/ Description: ----------- Time-Variant Specified-Head (chd) package list files for the medium rate of sea-level change and used in scenario 4. Files: ----- chd_base_medium_YYYYMMDD.dat : Time-Variant Specified-Head (chd) package list files corresponding to month MM, day DD, and year YYYY. chd_base_nochange/ Description: ----------- Time-Variant Specified-Head (chd) package list files for no sea-level change and used in scenarios 1 and 2. Files: ----- chd_base_nochange_YYYYMMDD.dat : Time-Variant Specified- Head (chd) package list files corresponding to month MM, day DD, and year YYYY. drt/ Description: ----------- Drain (drain) package list files used in scenarios 1, 2, 3, 4, 5, 6, and 7. Monthly data for year 2011 is used for all years simulated in the scenarios. Files: ----- drt_2011MMDD.dat : Drain (drn) package list files corresponding to month MM and day DD for all scenario simulation years. ghb_base_high/ Description: ----------- General-Head Boundary (ghb) package list files for the high rate of sea-level change and used in scenarios 5, 6, and 7. Files: ----- ghb_base_high_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY. ghb_base_low/ Description: ----------- General-Head Boundary (ghb) package list files for the low rate of sea-level change and used in scenario 3. Files: ----- ghb_base_low_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY. ghb_base_medium/ Description: ----------- General-Head Boundary (ghb) package list files for the medium rate of sea-level change and used in scenario 4. Files: ----- ghb_base_medium_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY. ghb_base_nochange/ Description: ----------- General-Head Boundary (ghb) package list files for no sea-level change and used in scenarios 1 and 2. Files: ----- ghb_base_nochange_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY riv_high/ Description: ----------- River (riv) package list files for the high rate of sea-level change and used in scenarios 5 and 7. Files: ----- riv_high_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. riv_high_MoveG54/ Description: ----------- River (riv) package list files for the high rate of sea-level change and moving of G-54 and used in scenario 6. Files: ----- riv_high_MoveG54_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. riv_low/ Description: ----------- River (riv) package list files for the low rate of sea-level change and used in scenario 3. Files: ----- riv_low_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. riv_medium/ Description: ----------- River (riv) package list files for the medium rate of sea-level change and used in scenario 4. Files: ----- riv_medium_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. riv_nochange/ Description: ----------- River (riv) package list files for no sea-level change and used in scenarios 1 and 2. Files: ----- riv_nochange_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. wel_base/ Description: ----------- Well (wel) package list files for the base scenario groundwater withdrawals and used in scenario 1. Files: ----- wel_base_MM.dat : Well (wel) package list files corresponding to month MM and used for every year in the scenario. wel_permitted/ Description: ----------- Well (wel) package list files for the permitted scenario groundwater withdrawals and used in scenarios 2, 3, 4, 5, and 6. Files: ----- wel_permitted_MM.dat : Well (wel) package list files corresponding to month MM and used for every year in the scenario. wel_permitted_rechargewells/ Description: ----------- Well (wel) package list files for the permitted scenario groundwater withdrawals and Hallandale recharge wells and used in scenario 7. Files: ----- wel_permitted_rechargewells_MM.dat : Well (wel) package list files corresponding to month MM and used for every year in the scenario. seawatlist.sensi/ Description: ----------- Boundary condition list files for chd, ghb, and riv package files used for the sensitivity simulations for the period from 1/1950 through 5/2012. Files: ----- None chd_sensi_nochange/ Description: ----------- Time-Variant Specified-Head (chd) package list files for no sea-level change sensitivity simulations. Files: ----- chd_sensi_nochange_YYYYMMDD.dat : Time-Variant Specified- Head (chd) package list files corresponding to month MM, day DD, and year YYYY. ghb_sensi_nochange/ Description: ----------- General-Head Boundary (ghb) package list files for no sea-level change sensitivity simulations. Files: ----- ghb_sensi_nochange_YYYYMMDD.dat : General-Head Boundary (ghb) package list files corresponding to month MM, day DD, and year YYYY. riv_cali/ Description: ----------- River (riv) package list files for the history matching period and used in the history-matching simulation. These files are equivalent to the data in model/external_files/flow.riv Files: ----- riv_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. riv_nochange/ Description: ----------- River (riv) package list files for no sea-level change sensitivity simulations. Files: ----- riv_nochange_YYYYMMDD.dat : River (riv) package list files corresponding to month MM, day DD, and year YYYY. seawatref/ Description: ----------- Two-dimensional array files that define model parameters and layer elevations for the history-matching, sensitivity, and scenario simulations that are not based on simulated history-matching results. Files: ----- ibound_CS.ref : offshore_CS.ref : two-dimensional real array that defines offshore areas of the model - used for plotting mod/ Description: ----------- two-dimensional arrays that define model parameters and layer elevations. Some files are not used by the models but are used for plotting purposes. Files: ----- al_1.ref : al_10.ref : al_11.ref : al_12.ref : al_2.ref : al_3.ref : al_4.ref : al_5.ref : al_6.ref : al_7.ref : al_8.ref : al_9.ref : botm_0.ref : btn_top_1.ref : hk_10_1.ref : hk_11_1.ref : hk_12_1.ref : hk_1_1.ref : hk_2_1.ref : hk_3_1.ref : hk_4_1.ref : hk_5_1.ref : hk_6_1.ref : hk_7_1.ref : hk_8_1.ref : hk_9_1.ref : H_Q5_Q4_thk.ref : ibound_1.ref : ibound_10.ref : ibound_11.ref : ibound_12.ref : ibound_2.ref : ibound_3.ref : ibound_4.ref : ibound_5.ref : ibound_6.ref : ibound_7.ref : ibound_8.ref : ibound_9.ref : icbund_1.ref : icbund_10.ref : icbund_11.ref : icbund_12.ref : icbund_2.ref : icbund_3.ref : icbund_4.ref : icbund_5.ref : icbund_6.ref : icbund_7.ref : icbund_8.ref : icbund_9.ref : prsity_1.ref : prsity_10.ref : prsity_11.ref : prsity_12.ref : prsity_2.ref : prsity_3.ref : prsity_4.ref : prsity_5.ref : prsity_6.ref : prsity_7.ref : prsity_8.ref : prsity_9.ref : Q1_1_bot.ref : Q1_1_thk.ref : Q1_2_bot.ref : Q1_2_thk.ref : Q1_3_bot.ref : Q1_3_thk.ref : Q1_4_bot.ref : Q1_4_thk.ref : Q2_1_bot.ref : Q2_1_thk.ref : Q2_2_bot.ref : Q2_2_thk.ref : Q2_3_bot.ref : Q2_3_thk.ref : Q2_4_bot.ref : Q2_4_thk.ref : Q3_bot.ref : Q3_thk.ref : Q4_bot.ref : sconc_1_1.ref : sconc_1_10.ref : sconc_1_11.ref : sconc_1_12.ref : sconc_1_2.ref : sconc_1_3.ref : sconc_1_4.ref : sconc_1_5.ref : sconc_1_6.ref : sconc_1_7.ref : sconc_1_8.ref : sconc_1_9.ref : ss_10_1.ref : ss_11_1.ref : ss_12_1.ref : ss_1_1.ref : ss_2_1.ref : ss_3_1.ref : ss_4_1.ref : ss_5_1.ref : ss_6_1.ref : ss_7_1.ref : ss_8_1.ref : ss_9_1.ref : strt_1.ref : strt_10.ref : strt_11.ref : strt_12.ref : strt_2.ref : strt_3.ref : strt_4.ref : strt_5.ref : strt_6.ref : strt_7.ref : strt_8.ref : strt_9.ref : sy_10_1.ref : sy_11_1.ref : sy_12_1.ref : sy_1_1.ref : sy_2_1.ref : sy_3_1.ref : sy_4_1.ref : sy_5_1.ref : sy_6_1.ref : sy_7_1.ref : sy_8_1.ref : sy_9_1.ref : T1_bot.ref : T1_thk.ref : T2_bot.ref : T2_thk.ref : top_1.ref : vka_10_1.ref : vka_11_1.ref : vka_12_1.ref : vka_1_1.ref : vka_2_1.ref : vka_3_1.ref : vka_4_1.ref : vka_5_1.ref : vka_6_1.ref : vka_7_1.ref : vka_8_1.ref : vka_9_1.ref : seawatref.scenarios/ Description: ----------- Two-dimensional array files that define model parameters that differ from the history-matching simulation and are based on simulated history-matching results. Files: ----- None mod/ Description: ----------- Starting heads and concentrations for the scenario simulations. These are extracted from the final heads and concentrations in the history-matching simulation. Files: ----- sconc_scenario_1.ref : sconc_scenario_10.ref : sconc_scenario_11.ref : sconc_scenario_12.ref : sconc_scenario_2.ref : sconc_scenario_3.ref : sconc_scenario_4.ref : sconc_scenario_5.ref : sconc_scenario_6.ref : sconc_scenario_7.ref : sconc_scenario_8.ref : sconc_scenario_9.ref : strt_scenario_1.ref : strt_scenario_10.ref : strt_scenario_11.ref : strt_scenario_12.ref : strt_scenario_2.ref : strt_scenario_3.ref : strt_scenario_4.ref : strt_scenario_5.ref : strt_scenario_6.ref : strt_scenario_7.ref : strt_scenario_8.ref : strt_scenario_9.ref : scen01/ Description: ----------- This directory contains contains the scenario 1 name file used to make the scenario 1 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen01.nam : SEAWAT (v4) name file - base pumpage and no sea-level change scenario (scenario 1) usgs.model.reference : temporal and spatial reference for the scenario 1 model. scen02/ Description: ----------- This directory contains contains the scenario 2 name file used to make the scenario 2 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen02.nam : SEAWAT (v4) name file - permitted pumpage and no sea-level change scenario (scenario 2) usgs.model.reference : temporal and spatial reference for the scenario 2 model. scen03/ Description: ----------- This directory contains contains the scenario 3 name file used to make the scenario 3 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen03.nam : SEAWAT (v4) name file - permitted pumpage and low rate of sea-level change scenario (scenario 3) usgs.model.reference : temporal and spatial reference for the scenario 3 model. scen04/ Description: ----------- This directory contains contains the scenario 4 name file used to make the scenario 4 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen04.nam : SEAWAT (v4) name file - permitted pumpage and medium rate of sea-level change scenario (scenario 4) usgs.model.reference : temporal and spatial reference for the scenario 4 model. scen05/ Description: ----------- This directory contains contains the scenario 5 name file used to make the scenario 5 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen05.nam : SEAWAT (v4) name file - permitted pumpage and high rate of sea-level change scenario (scenario 5) usgs.model.reference : temporal and spatial reference for the scenario 5 model. scen06/ Description: ----------- This directory contains contains the scenario 6 name file used to make the scenario 6 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen06.nam : SEAWAT (v4) name file - permitted pumpage, high rate of sea-level change, and G-54 structure move scenario (scenario 6) usgs.model.reference : temporal and spatial reference for the scenario 6 model. scen07/ Description: ----------- This directory contains contains the scenario 7 name file used to make the scenario 7 run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.scen07.nam : SEAWAT (v4) name file - permitted pumpage, high rate of sea-level change, and Hallandale recharge wells scenario (scenario 7) usgs.model.reference : temporal and spatial reference for the scenario 7 model. sensi.nochange/ Description: ----------- This directory contains contains the no change sensitivity name file used to make the no change sensitivity run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.sensi.nochange.nam : SEAWAT (v4) name file - sensitivity run to evaluate the effect of historic sea-level change on the distribution of saltwater in the Biscayne aquifer usgs.model.reference : temporal and spatial reference for the no change sensitivity model. sensi.nowell/ Description: ----------- This directory contains contains the no well sensitivity name file used to make the no well sensitivity run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.sensi.nowell.nam : SEAWAT (v4) name file - sensitivity run to evaluate the effect of historic groundwater withdrawals on the distribution of saltwater in the Biscayne aquifer usgs.model.reference : temporal and spatial reference for the no well sensitivity model. sensi.nowell.nochange/ Description: ----------- This directory contains contains the no well and no change sensitivity name file used to make the no well and no change sensitivity run documented in the report. doi: 10.3133/sir20165022 Files: ----- brow.cs.sensi.nowell.nochange.nam : SEAWAT (v4) name file - sensitivity run to evaluate the effect of historic sea-level change and groundwater withdrawals on the distribution of saltwater in the Biscayne aquifer usgs.model.reference : temporal and spatial reference for the no well and no change sensitivity model. output/ Description: ----------- This directory contains all of the output files for the history matching run, the 3 sensitivity runs, and the 7 scenario runs documented in the report. doi: 10.3133/sir20165022 Files: ----- None Analysis/ Description: ----------- Global head and concentration statistics for the history- matching period. Historical analysis of groundwater pumpage by well field are also included. Files: ----- GlobalHeadStats.txt : GlobalRConcentrationStats.txt : WellfieldPumpage.txt : output.calibration/ Description: ----------- Simulated results for the history matching simulation. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file navd_cali_processed.smp : Processed simulated head observations relconc_merge_cali.smp : Processed simulated concentration observations seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file well_conc.smp : Processed simulated concentration observations wfield_conc.smp : Processed simulated flow-weighted well field concentration observations output.scen01/ Description: ----------- Simulated results for scenario 1. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen02/ Description: ----------- Simulated results for scenario 2. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen03/ Description: ----------- Simulated results for scenario 3. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen04/ Description: ----------- Simulated results for scenario 4. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen05/ Description: ----------- Simulated results for scenario 5. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen06/ Description: ----------- Simulated results for scenario 6. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.scen07/ Description: ----------- Simulated results for scenario 7. Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.sensi.nochange/ Description: ----------- Simulated results for the no change in sea level for the period from 1/1950 to 5/2012 sensitivity simulation Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.sensi.nowell/ Description: ----------- Simulated results for the no groundwater withdrawals for the period from 1/1950 to 5/2012 sensitivity simulation Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file output.sensi.nowell.nochange/ Description: ----------- Simulated results for the no change in sea level and no groundwater withdrawals for the period from 1/1950 to 5/2012 sensitivity simulation Files: ----- MT3D.CNF : MT3DMS ASCII model configuration file MT3D001.MAS : MT3DMS ASCII mass budget summary file MT3D001.OBS : MT3DMS ASCII observation concentration file MT3D001.UCN : MT3DMS binary concentration file seawat.hds : MODFLOW binary head file seawat.list : MODFLOW listing (summary) file of simulation seawat_hyd.bin : MODFLOW binary HYDMOD package output file plots/ Description: ----------- Post-processed model results figures. Modified versions of many of these figures have been included in the model report. These figures were created using the python post-processing scripts included in the output/python subdirectory. Files: ----- None head/ Description: ----------- Maps showing simulated heads for the history-matching period and sensitivity simulations. Files: ----- historic.head.Base.Layer01.active.1970.pdf : historic.head.Base.Layer01.active.1980.pdf : historic.head.Base.Layer01.active.1990.pdf : historic.head.Base.Layer01.active.2000.pdf : historic.head.Base.Layer01.active.2005.pdf : historic.head.Base.Layer01.active.2011.pdf : sensi.nochange.head.Base.Layer01.focus.2011.pdf : sensi.nowell.head.Base.Layer01.focus.2011.pdf : sensi.nowellnochange.head.Base.Layer01.focus.2011.pdf : obsconc/ Description: ----------- Time-series figures showing simulated concentrations at select observation locations and flow weighted concentrations at select well fields. Files: ----- rconc_01.pdf : rconc_02.pdf : wellfield_01.pdf : wellfield_02.pdf : obshead/ Description: ----------- Time-series figures showing simulated groundwater levels at select observation locations. Files: ----- head_01.pdf : head_02.pdf : ucn/ Description: ----------- Maps showing the distribution of seawater at the base of the Biscayne aquifer at select times for the history-matching simulation, sensitivity simulations, and scenario simulations. Files: ----- Historic.conc.1970-2011.focus.Base.pdf : Historic.conc.2011.Base.pdf : scenario.conc.MoveG54.focus.50.pdf : scenario.conc.pumpage.focus.50.pdf : scenario.conc.RechargeWells.hallholl.50.pdf : scenario.conc.sea-level.focus.50.pdf : sensi.nochange.conc.Base.focus.2011.pdf : sensi.nowell.conc.Base.focus.2011.pdf : sensi.nowellnochange.conc.Base.focus.2011.pdf : wellfield_ucn/ Description: ----------- Time-series figures showing flow-weighted well field chloride concentrations for the scenario simulations. Files: ----- scenario.wellfield.conc.MoveG54.pdf : scenario.wellfield.conc.pumpage.pdf : scenario.wellfield.conc.RechargeWells.pdf : scenario.wellfield.conc.sea-level.pdf : xsect/ Description: ----------- Figures showing cross sections at select locations in the model domain showing the distribution of seawater at select locations and times for the history-matching simulation and scenario 7. Files: ----- xsect01_2011_Historic.pdf : xsect01_2011_Historic.swisources.pdf : xsect01_Prospect_Scenario7.pdf : xsect02_2011_Historic.pdf : xsect02_Dixie_Scenario7.pdf : xsect03_Dania_Scenario7.pdf : xsect04_Hollywood_Scenario7.pdf : xsect05_Hallandale_Scenario7.pdf : python/ Description: ----------- Post-processing python scripts used to generate model related figures included in the model documentation report. The post-processing python scripts rely on the flopy and cluster_repo python packages included in the source directory. flopy requires NumPy 1.9 (or higher) and matplotlib 1.4 (or higher). The mapping and cross-section capabilities in the flopy.plot submodule require Pyshp 1.2 (or higher). The cluster_repo python package has also been included because several of the python pre- and post-processing scripts use the functionality in classes and methods. In particular, the classes and methods in shapefile.py and pestUtil.py are used. cluster_repo requires NumPy 1.9 or higher and pandas 0.15.2 or higher. The post-processing mapping scripts also require Basemap 1.0.7 or higher. Files: ----- bro.py : generic classes that define key aspects of the model files in this model archive. For example, the number of layers, rows, and columns in the model and the x- and y-offset of the model are defined in this file brow.cs.histconc.mapfig.py : brow.cs.mapfig.py : brow.cs.scenario.wellfield.py : bro_map_plot.py : generic functionality for plotting map data as presented in the report. PlotAllOutput.out : Summary output from PlotAll.py PlotAllOutput.py : Python script to plot all results included in the output/plots/ subdirectory. PlotCrossSections.py : PlotGeoCrossSections.py : PlotObsSim.py : plotTimeSeries.py : generic functionality for plotting time-series data as presented in the report PlotWellData.py : wellaux2wellfield.txt : Defines the relation of well name to specific well field smp/ Description: ----------- PEST bore sample time-series files used for comparison of simulated and observed data. Files: ----- mod/ Description: ----------- Simulated head, concentration, and flow-weighted well field concentration observation PEST bore sample files. Files: ----- navd_cali.smp : relconc_merge_cali.smp : well_conc.smp : wfield_conc.smp : obs/ Description: ----------- Observed head, concentration, and flow-weighted well field concentration observation PEST bore sample files. Also includes observed surface-water structure flow data and annual volumes. Files: ----- calibration_wfconc.smp : navd_cali.smp : navd_cali_processed.smp : relconc_merge_cali.smp : relconc_merge_cali_processed.smp : relconc_merge_cali_raw.smp : struct_annvol.smp : struct_flow.smp : wfield_conc.smp : source/ Description: ----------- Source files for non-standard code versions used to run model simulations included in the model archive. SEAWAT version 4 source code for MT3DMS was modified to create observation output that is easier to post-process with python. The standard version of SEAWAT version 4 can also be used but observation output would have a different format that would not be able to be prost processed with the python scripts included in this archive. The flopy python package (version 3.0.3) has also been included. flopy post-processing methods are used in the python post-processing scripts to read binary MODFLOW and MT3DMS output files. This version of flopy is developed for python 2.7. Current version of flopy can be found at https://github.com/modflowpy/flopy. flopy requires NumPy 1.9 (or higher) and matplotlib 1.4 (or higher). The mapping and cross-section capabilities in the flopy.plot submodule require Pyshp 1.2 (or higher). The cluster_repo python package has also been included because several of the python pre- and post-processing scripts use the functionality in classes and methods. In particular, the classes and methods in shapefile.py and pestUtil.py are used. cluster_repo requires NumPy 1.9 or higher and pandas 0.15.2 or higher. Files: ----- None cluster_repo/ Description: ----------- cluster_repo python package used by python pre- and post- processing scripts. Files: ----- MFArrayUtil.py : MFBinaryClass.py : MFData.py : MFInterpolators.py : pestUtil.py : shapefile.py : __init__.py : flopy/ Description: ----------- Base flopy functionality Files: ----- mbase.py : version.py : __init__.py : modflow/ Description: ----------- flopy MODFLOW classes and associated methods Files: ----- mf.py : mfaddoutsidefile.py : mfbas.py : mfbcf.py : mfbct.py : mfchd.py : mfde4.py : mfdis.py : mfdrn.py : mfevt.py : mfghb.py : mfgmg.py : mfhfb.py : mflmt.py : mflpf.py : mfmlt.py : mfmnw1.py : mfmnw2.py : mfmnwi.py : mfnwt.py : mfoc.py : mfpar.py : mfparbc.py : mfpbc.py : mfpcg.py : mfpcgn.py : mfpks.py : mfpval.py : mfrch.py : mfriv.py : mfsip.py : mfsms.py : mfsor.py : mfswi.py : mfswi2.py : mfswr1.py : mfupw.py : mfuzf1.py : mfwel.py : mfzon.py : __init__.py : modpath/ Description: ----------- flopy MODPATH classes and associated methods Files: ----- mp.py : mpbas.py : mpsim.py : __init__.py : mt3d/ Description: ----------- flopy MT3D classes and associated methods Files: ----- mt.py : mtadv.py : mtbtn.py : mtdsp.py : mtgcg.py : mtphc.py : mtrct.py : mtssm.py : mttob.py : __init__.py : plot/ Description: ----------- flopy plotting classes and associated methods Files: ----- plotutil.py : __init__.py : seawat/ Description: ----------- flopy SEAWAT classes and associated methods Files: ----- swt.py : swtvdf.py : __init__.py : utils/ Description: ----------- flopy utility classes and associated methods for reading and writing MODFLOW-based model array data, boundary condition data, and post-processing MODFLOW-based model results. Files: ----- binaryfile.py : binaryfile_recarray.py : binaryhydmodfile.py : binaryswrfile.py : mfreadbinaries.py : mfreadnam.py : mtreadbinaries.py : util_array.py : util_list.py : __init__.py : SEAWAT/ Description: ----------- SEAWAT version 4 source files. Files: ----- CCFD.c : CCFD.h : ctime.f : daf1.f : de45.f : filespec.inc : glo1bas6.f : gmg1.f : ground.com : gutsdaf.f : gwf1bas6.f : gwf1bcf6.f : gwf1chd6.f : gwf1drn6.f : gwf1drt1.f : gwf1ets1.f : gwf1evt6.f : gwf1fhb1.f : gwf1gag5.f : gwf1ghb6.f : gwf1hfb6.f : gwf1huf2.f : gwf1ibs6.f : gwf1lak3.f : gwf1lpf1.f : gwf1mnw1.f : gwf1rch6.f : gwf1res1.f : gwf1riv6.f : gwf1sfr2.f : gwf1str6.f : gwf1sub1.f : gwf1swt1.f : gwf1wel6.f : hufutl2.f : hydmod.f : hydmod.inc : imt1adv5.f : imt1btn5.f : imt1dsp5.f : imt1fmi5.f : imt1gcg5.f : imt1rct5.f : imt1ssm5.f : imt1tob5.f : imt1utl5.f : lmg1.f : lmt6.f : lmt6vd.inc : memchk.f : MF2KGMG.c : MF2KGMG.h : mhc1.f90 : obs1adv2.f : obs1bas6.f : obs1bas6vd.f : obs1drn6.f : obs1drn6vd.f : obs1drt1.f : obs1drt1vd.f : obs1ghb6.f : obs1ghb6vd.f : obs1riv6.f : obs1riv6vd.f : obs1str6.f : openspec.inc : para-non.f : parallel.inc : param.inc : params.inc : parutl1.f : pcg2.f : pes1bas6.f : pes1gau1.f : rtedaf.f : r_vector.c : r_vector.h : sen1bas6.f : sen1chd6.f : sen1drn6.f : sen1drt1.f : sen1ets1.f : sen1evt6.f : sen1ghb6.f : sen1hfb6.f : sen1huf2.f : sen1lpf1.f : sen1rch6.f : sen1riv6.f : sen1str6.f : sen1wel6.f : sip5.f : SOLVERS.c : SOLVERS.h : sor5.f : startdaf.com : swt_v4.f : utl6.f : vdf1.f : vdf1bas6.f : vdf1bcf6.f : vdf1chd6.f : vdf1drn6.f : vdf1drt1.f : vdf1ets1.f : vdf1evt6.f : vdf1fhb1.f : vdf1ghb6.f : vdf1huf2.f : vdf1lmt6.f : vdf1lpf1.f : vdf1mnw1.f : vdf1rch6.f : vdf1riv6.f : vdf1vsc1.f : vdf1wel6.f : parallel/ Description: ----------- Parallel source files for MODFLOW-2000 parameter estimation functionality. Files: ----- dlimport.inc : para-mpi.f : serial/ Description: ----------- Serial source files for MODFLOW-2000 parameter estimation functionality. Files: ----- para-non.f :